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  5. Sopen11g026290

Sopen11g026290


Description : Protein of unknown function N-terminal domain (DUF2450)


Gene families : OG_42_0003987 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003987_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen11g026290
Cluster HCCA clusters: Cluster_218

Target Alias Description ECC score Gene Family Method Actions
LOC_Os10g39910 No alias expressed protein 0.02 Orthogroups_2024-Update
Seita.9G336400.1 No alias EARP-specific component *(Syndetin-like) of GARP/EARP... 0.03 Orthogroups_2024-Update
Sobic.001G308400.1 No alias EARP-specific component *(Syndetin-like) of GARP/EARP... 0.03 Orthogroups_2024-Update
evm.model.contig_2146.12 No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
evm.model.tig00020912.37 No alias (at2g27900 : 112.0) CONTAINS InterPro DOMAIN/s: Protein... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR019515 VPS54_N 124 414
IPR019514 Syndetin_C 864 1092
No external refs found!