1. Home
  2. Species
  3. Populus trichocarpa
  4. Sequence
  5. Potri.001G407100

Potri.001G407100


Description : light-harvesting chlorophyll B-binding protein 3


Gene families : OG_42_0000070 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000070_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.001G407100
Cluster HCCA clusters: cluster_0011

Target Alias Description ECC score Gene Family Method Actions
A4A49_03871 No alias chlorophyll a-b binding protein 36, chloroplastic 0.03 Orthogroups_2024-Update
A4A49_64136 No alias chlorophyll a-b binding protein 13, chloroplastic 0.03 Orthogroups_2024-Update
AC207722.2_FG009 No alias photosystem II light harvesting complex gene B1B2 0.03 Orthogroups_2024-Update
At3g27690 No alias Chlorophyll a-b binding protein, chloroplastic... 0.03 Orthogroups_2024-Update
At4g10340 No alias Chlorophyll a-b binding protein, chloroplastic... 0.03 Orthogroups_2024-Update
Brara.B01393.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.B02273.1 No alias component *(LHCq) of LHC-II complex 0.03 Orthogroups_2024-Update
Brara.B03307.1 No alias component *(LHCb1/2/3) of LHC-II complex 0.03 Orthogroups_2024-Update
Brara.C01741.1 No alias component *(LHCb1/2/3) of LHC-II complex 0.04 Orthogroups_2024-Update
Brara.C02638.1 No alias component *(LHCb5) of LHC-II complex 0.04 Orthogroups_2024-Update
Brara.E00980.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.E00981.1 No alias component *(LHCb1/2/3) of LHC-II complex 0.03 Orthogroups_2024-Update
Brara.E00982.1 No alias component *(LHCb1/2/3) of LHC-II complex 0.03 Orthogroups_2024-Update
Brara.F01756.1 No alias component *(LHCa4) of LHC-I complex 0.04 Orthogroups_2024-Update
Brara.F03187.1 No alias component *(LHCb1/2/3) of LHC-II complex 0.03 Orthogroups_2024-Update
Brara.G01647.1 No alias component *(LHCa1) of LHC-I complex 0.03 Orthogroups_2024-Update
Brara.G01921.1 No alias component *(LHCa2) of LHC-I complex 0.04 Orthogroups_2024-Update
Brara.I00297.1 No alias component *(LHCb1/2/3) of LHC-II complex 0.04 Orthogroups_2024-Update
Brara.I02349.1 No alias component *(LHCb5) of LHC-II complex 0.02 Orthogroups_2024-Update
Brara.I02856.1 No alias component *(LHCb1/2/3) of LHC-II complex 0.03 Orthogroups_2024-Update
Brara.I03747.1 No alias component *(LHCa1) of LHC-I complex 0.03 Orthogroups_2024-Update
Brara.J00907.1 No alias component *(LHCb1/2/3) of LHC-II complex 0.04 Orthogroups_2024-Update
GRMZM2G072280 No alias photosystem I light harvesting complex gene 2 0.03 Orthogroups_2024-Update
GRMZM2G160268 No alias light-harvesting chlorophyll-protein complex I subunit A4 0.02 Orthogroups_2024-Update
GRMZM2G429955 No alias photosystem II light harvesting complex gene B1B2 0.03 Orthogroups_2024-Update
Glyma.03G262300 No alias photosystem I light harvesting complex gene 2 0.03 Orthogroups_2024-Update
Glyma.08G082900 No alias chlorophyll A/B binding protein 1 0.03 Orthogroups_2024-Update
Glyma.12G219300 No alias light-harvesting chlorophyll B-binding protein 3 0.03 Orthogroups_2024-Update
Glyma.16G165500 No alias light-harvesting chlorophyll-protein complex II subunit B1 0.03 Orthogroups_2024-Update
HORVU1Hr1G078380.1 No alias component *(LHCb1/2/3) of LHC-II complex 0.02 Orthogroups_2024-Update
HORVU1Hr1G088870.2 No alias component *(LHCb1/2/3) of LHC-II complex 0.03 Orthogroups_2024-Update
HORVU1Hr1G088900.2 No alias component *(LHCb1/2/3) of LHC-II complex 0.04 Orthogroups_2024-Update
HORVU1Hr1G088920.3 No alias component *(LHCb1/2/3) of LHC-II complex 0.03 Orthogroups_2024-Update
HORVU1Hr1G089180.1 No alias component *(LHCb1/2/3) of LHC-II complex 0.04 Orthogroups_2024-Update
HORVU4Hr1G015260.2 No alias component *(LHCb5) of LHC-II complex 0.02 Orthogroups_2024-Update
HORVU5Hr1G082420.2 No alias component *(LHCb1/2/3) of LHC-II complex 0.03 Orthogroups_2024-Update
HORVU5Hr1G109360.1 No alias component *(LHCb1/2/3) of LHC-II complex 0.02 Orthogroups_2024-Update
HORVU6Hr1G016850.1 No alias component *(LHCb1/2/3) of LHC-II complex 0.04 Orthogroups_2024-Update
HORVU6Hr1G016880.1 No alias component *(LHCb1/2/3) of LHC-II complex 0.03 Orthogroups_2024-Update
HORVU6Hr1G016890.6 No alias component *(LHCb1/2/3) of LHC-II complex 0.02 Orthogroups_2024-Update
HORVU6Hr1G016940.1 No alias component *(LHCb1/2/3) of LHC-II complex 0.04 Orthogroups_2024-Update
HORVU7Hr1G046320.1 No alias component *(LHCa1) of LHC-I complex 0.02 Orthogroups_2024-Update
LOC_Os01g41710 No alias chlorophyll A-B binding protein, putative, expressed 0.04 Orthogroups_2024-Update
LOC_Os06g21590 No alias chlorophyll A-B binding protein, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os07g37550 No alias chlorophyll A-B binding protein, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os08g33820 No alias chlorophyll A-B binding protein, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os11g13890 No alias chlorophyll A-B binding protein, putative, expressed 0.04 Orthogroups_2024-Update
MA_65346g0010 No alias (at3g47470 : 317.0) Encodes a chlorophyll a/b-binding... 0.02 Orthogroups_2024-Update
Mp1g29620.1 No alias component LHCb1/2/3 of LHC-II complex 0.03 Orthogroups_2024-Update
Mp7g05890.1 No alias component LHCb1/2/3 of LHC-II complex 0.03 Orthogroups_2024-Update
Mp7g06720.1 No alias component LHCb1/2/3 of LHC-II complex 0.03 Orthogroups_2024-Update
Mp7g06730.1 No alias component LHCb1/2/3 of LHC-II complex 0.03 Orthogroups_2024-Update
Mp7g06750.1 No alias component LHCb1/2/3 of LHC-II complex 0.03 Orthogroups_2024-Update
Mp7g06770.1 No alias component LHCb1/2/3 of LHC-II complex 0.03 Orthogroups_2024-Update
Potri.005G258600 No alias Chlorophyll A-B binding family protein 0.03 Orthogroups_2024-Update
Potri.011G079500 No alias light-harvesting chlorophyll-protein complex II subunit B1 0.05 Orthogroups_2024-Update
Pp1s182_81V6 No alias chlorophyll a b binding 0.02 Orthogroups_2024-Update
Pp1s19_13V6 No alias light-harvesting complex ii protein lhcb2 0.02 Orthogroups_2024-Update
Pp1s241_66V6 No alias chlorophyll a-b binding protein 0.03 Orthogroups_2024-Update
Pp1s284_6V6 No alias chlorophyll a b binding 0.02 Orthogroups_2024-Update
Pp1s6_312V6 No alias light-harvesting complex ii protein lhcb5 0.02 Orthogroups_2024-Update
Pp1s76_196V6 No alias chlorophyll a b binding 0.02 Orthogroups_2024-Update
Sobic.002G352100.1 No alias component *(LHCa2) of LHC-I complex 0.02 Orthogroups_2024-Update
Solyc02g070940 No alias Chlorophyll a-b binding protein, chloroplastic (AHRD... 0.03 Orthogroups_2024-Update
Solyc02g070970 No alias Chlorophyll a-b binding protein, chloroplastic (AHRD... 0.04 Orthogroups_2024-Update
Solyc02g070980 No alias Chlorophyll a-b binding protein, chloroplastic (AHRD... 0.04 Orthogroups_2024-Update
Solyc02g070990 No alias Chlorophyll a-b binding protein, chloroplastic (AHRD... 0.03 Orthogroups_2024-Update
Solyc02g071000 No alias Chlorophyll a-b binding protein, chloroplastic (AHRD... 0.03 Orthogroups_2024-Update
Solyc02g071010 No alias Chlorophyll a-b binding protein, chloroplastic (AHRD... 0.04 Orthogroups_2024-Update
Solyc03g005770 No alias chlorophyll a/b-binding protein 0.03 Orthogroups_2024-Update
Solyc03g115900 No alias chlorophyll a-b binding protein CAB11 0.03 Orthogroups_2024-Update
Solyc07g063600 No alias Chlorophyll a-b binding protein, chloroplastic (AHRD... 0.03 Orthogroups_2024-Update
Solyc08g067330 No alias Chlorophyll a-b binding protein, chloroplastic (AHRD... 0.03 Orthogroups_2024-Update
Solyc10g006230 No alias Chlorophyll a-b binding protein, chloroplastic (AHRD... 0.03 Orthogroups_2024-Update
Solyc12g009200 No alias Chlorophyll a-b binding protein, chloroplastic (AHRD... 0.03 Orthogroups_2024-Update
Sopen12g004150 No alias Chlorophyll A-B binding protein 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR022796 Chloroa_b-bind 62 229
No external refs found!