Potri.001G417600


Description : ABC transporter family protein


Gene families : OG_42_0000040 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000040_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.001G417600
Cluster HCCA clusters: cluster_0185

Target Alias Description ECC score Gene Family Method Actions
123915 No alias P-glycoprotein 11 0.02 Orthogroups_2024-Update
Brara.I01830.1 No alias subfamily ABCB transporter 0.04 Orthogroups_2024-Update
Brara.I01939.1 No alias subfamily ABCB transporter 0.03 Orthogroups_2024-Update
GRMZM2G333183 No alias ATP binding cassette subfamily B1 0.03 Orthogroups_2024-Update
Glyma.16G078100 No alias ABC transporter family protein 0.03 Orthogroups_2024-Update
LOC_Os01g74470 No alias ABC transporter, ATP-binding protein, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os05g47490 No alias MDR-like ABC transporter, putative, expressed 0.03 Orthogroups_2024-Update
Mp2g11920.1 No alias subfamily ABCB transporter 0.03 Orthogroups_2024-Update
Potri.001G165000 No alias ATP binding cassette subfamily B19 0.03 Orthogroups_2024-Update
Potri.006G074000 No alias ABC transporter family protein 0.03 Orthogroups_2024-Update
Potri.008G050400 No alias P-glycoprotein 20 0.03 Orthogroups_2024-Update
Potri.010G003000 No alias ATP binding cassette subfamily B4 0.04 Orthogroups_2024-Update
Potri.011G133800 No alias P-glycoprotein 18 0.03 Orthogroups_2024-Update
Seita.1G055700.1 No alias subfamily ABCB transporter 0.02 Orthogroups_2024-Update
Sobic.004G073300.1 No alias subfamily ABCB transporter 0.02 Orthogroups_2024-Update
Solyc03g093650 No alias ABC transporter B family protein (AHRD V3.3 *** A0A072UBK0_MEDTR) 0.02 Orthogroups_2024-Update
Solyc12g098840 No alias ABC transporter B family protein (AHRD V3.3 *** G7IBR0_MEDTR) 0.03 Orthogroups_2024-Update
Sopen09g003060 No alias ABC transporter transmembrane region 0.04 Orthogroups_2024-Update
Sopen12g023550 No alias ABC transporter 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan predictions
CC GO:0016021 integral component of membrane IEA InterProScan predictions
MF GO:0016887 ATPase activity IEA InterProScan predictions
MF GO:0042626 ATPase activity, coupled to transmembrane movement of substances IEA InterProScan predictions
BP GO:0055085 transmembrane transport IEA InterProScan predictions
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003439 ABC_transporter-like 1024 1172
IPR011527 ABC1_TM_dom 19 293
IPR011527 ABC1_TM_dom 681 953
IPR003439 ABC_transporter-like 362 511
No external refs found!