Potri.001G440900

Description : Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein

Gene families : OG_42_0001408 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001408_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Populus release: Potri.001G440900
Cluster	HCCA clusters: cluster_0184

Target	Alias	Description	ECC score	Gene Family Method	Actions
PSME_00012869-RA	No alias	(at1g08620 : 807.0) PKDM7D; FUNCTIONS IN:...	0.03	Orthogroups_2024-Update
Solyc02g069740	No alias	Transcription factor jumonji family protein (AHRD V3.3...	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	InterProScan predictions
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR003889	FYrich_C	942	1026
IPR003888	FYrich_N	891	935
IPR004198	Znf_C5HC2	519	571
IPR003347	JmjC_dom	296	412
IPR003349	JmjN	57	90

External Links

No external refs found!