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  5. Sopen11g026820

Sopen11g026820


Description : Domain of unknown function (DUF1744)


Gene families : OG_42_0003443 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003443_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen11g026820
Cluster HCCA clusters: Cluster_103

Target Alias Description ECC score Gene Family Method Actions
PSME_00003464-RA No alias (at1g08260 : 1385.0) Similar to POL2A, DNA polymerase... 0.02 Orthogroups_2024-Update
Sobic.004G156200.1 No alias catalytic component *(POL2/POLE1) of DNA polymerase... 0.02 Orthogroups_2024-Update
Solyc11g067110 No alias DNA polymerase epsilon catalytic subunit (AHRD V3.3 *-*... 0.12 Orthogroups_2024-Update
Solyc11g067120 No alias No description available 0.17 Orthogroups_2024-Update
Solyc11g067130 No alias No description available 0.13 Orthogroups_2024-Update
Solyc11g067140 No alias DNA polymerase epsilon catalytic subunit A (AHRD V3.3... 0.15 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEA InterProScan predictions
MF GO:0003677 DNA binding IEA InterProScan predictions
MF GO:0003887 DNA-directed DNA polymerase activity IEA InterProScan predictions
CC GO:0005634 nucleus IEA InterProScan predictions
BP GO:0006260 DNA replication IEA InterProScan predictions
MF GO:0008270 zinc ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR006134 DNA-dir_DNA_pol_B_multi_dom 758 1115
IPR006133 DNA-dir_DNA_pol_B_exonuc 77 402
IPR013697 DNA_pol_e_suA_C 1524 1892
No external refs found!