Potri.001G459200

Description : FAD-binding Berberine family protein

Gene families : OG_42_0000069 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000069_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Populus release: Potri.001G459200
Cluster	HCCA clusters: cluster_0068

Target	Alias	Description	ECC score	Gene Family Method
A4A49_03083	No alias	reticuline oxidase-like protein	0.05	Orthogroups_2024-Update
AC203909.3_FG007	No alias	FAD-binding Berberine family protein	0.03	Orthogroups_2024-Update
GRMZM2G348846	No alias	FAD-binding Berberine family protein	0.03	Orthogroups_2024-Update
Glyma.08G080500	No alias	FAD-binding Berberine family protein	0.05	Orthogroups_2024-Update
LOC_Os02g14090	No alias	berberine and berberine like domain containing protein, expressed	0.03	Orthogroups_2024-Update
PSME_00030437-RA	No alias	(at2g34810 : 230.0) FAD-binding Berberine family...	0.02	Orthogroups_2024-Update
Potri.001G462700	No alias	FAD-binding Berberine family protein	0.03	Orthogroups_2024-Update
Potri.001G470100	No alias	FAD-binding Berberine family protein	0.03	Orthogroups_2024-Update
Seita.6G055100.1	No alias	EC_1.1 oxidoreductase acting on CH-OH group of donor	0.03	Orthogroups_2024-Update
Solyc02g070070	No alias	FAD-binding Berberine family protein (AHRD V3.3 *** AT2G34790.1)	0.03	Orthogroups_2024-Update
Solyc02g079440	No alias	FAD-binding Berberine family protein (AHRD V3.3 *** AT4G20860.1)	0.02	Orthogroups_2024-Update
Solyc03g006690	No alias	LOW QUALITY:FAD-binding Berberine family protein (AHRD...	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0016491	oxidoreductase activity	IEA	InterProScan predictions
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0048037	cofactor binding	None	Extended
MF	GO:0050660	flavin adenine dinucleotide binding	IEA	InterProScan predictions
MF	GO:0050662	coenzyme binding	None	Extended
BP	GO:0055114	oxidation-reduction process	IEA	InterProScan predictions
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR006094	Oxid_FAD_bind_N	79	215
IPR012951	BBE	469	526

External Links

No external refs found!