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  5. Potri.001G459900

Potri.001G459900


Description : pentatricopeptide (PPR) repeat-containing protein


Gene families : OG_42_0004203 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004203_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.001G459900
Cluster HCCA clusters: cluster_0065

Target Alias Description ECC score Gene Family Method Actions
At5g67570 No alias Pentatricopeptide repeat-containing protein At5g67570,... 0.02 Orthogroups_2024-Update
Bradi2g46360 No alias pentatricopeptide (PPR) repeat-containing protein 0.03 Orthogroups_2024-Update
Brara.I02793.1 No alias plastidial mRNA processing factor *(SOT5) 0.03 Orthogroups_2024-Update
GRMZM2G059449 No alias pentatricopeptide (PPR) repeat-containing protein 0.03 Orthogroups_2024-Update
HORVU3Hr1G061950.1 No alias plastidial mRNA processing factor *(SOT5) 0.03 Orthogroups_2024-Update
Seita.5G267700.1 No alias plastidial mRNA processing factor *(SOT5) 0.03 Orthogroups_2024-Update
Seita.9G353900.1 No alias regulatory factor *(DG1) of plastid-encoded RNA... 0.03 Orthogroups_2024-Update
Sobic.001G326300.1 No alias regulatory factor *(DG1) of plastid-encoded RNA... 0.04 Orthogroups_2024-Update
Solyc02g069570 No alias Pentatricopeptide repeat-containing protein, putative... 0.03 Orthogroups_2024-Update
Sopen02g036880 No alias PPR repeat 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 926 958
IPR002885 Pentatricopeptide_repeat 753 797
IPR002885 Pentatricopeptide_repeat 976 1006
IPR002885 Pentatricopeptide_repeat 826 855
IPR002885 Pentatricopeptide_repeat 895 922
IPR002885 Pentatricopeptide_repeat 672 699
No external refs found!