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  5. Potri.001G462100

Potri.001G462100


Description : FAD-binding Berberine family protein


Gene families : OG_42_0000069 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000069_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.001G462100
Cluster HCCA clusters: cluster_0092

Target Alias Description ECC score Gene Family Method Actions
At1g26420 No alias Berberine bridge enzyme-like 7... 0.03 Orthogroups_2024-Update
At1g30740 No alias FAD-binding Berberine family protein [Source:TAIR;Acc:AT1G30740] 0.03 Orthogroups_2024-Update
Bradi5g17300 No alias FAD-binding Berberine family protein 0.04 Orthogroups_2024-Update
Brara.A01126.1 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor 0.03 Orthogroups_2024-Update
Brara.I03114.1 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor 0.03 Orthogroups_2024-Update
Glyma.15G132600 No alias FAD-binding Berberine family protein 0.03 Orthogroups_2024-Update
Glyma.15G134300 No alias FAD-binding Berberine family protein 0.03 Orthogroups_2024-Update
Seita.4G178100.1 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor 0.02 Orthogroups_2024-Update
Solyc02g079450 No alias FAD-binding Berberine family protein (AHRD V3.3 *** AT5G44360.2) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA InterProScan predictions
MF GO:0050660 flavin adenine dinucleotide binding IEA InterProScan predictions
BP GO:0055114 oxidation-reduction process IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR012951 BBE 471 528
IPR006094 Oxid_FAD_bind_N 78 214
No external refs found!