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  5. Potri.001G462200

Potri.001G462200


Description : FAD-binding Berberine family protein


Gene families : OG_42_0000069 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000069_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.001G462200
Cluster HCCA clusters: cluster_0054

Target Alias Description ECC score Gene Family Method Actions
A4A49_21867 No alias flavin-dependent oxidoreductase fox1 0.03 Orthogroups_2024-Update
A4A49_37478 No alias flavin-dependent oxidoreductase fox2 0.03 Orthogroups_2024-Update
At4g20820 No alias Berberine bridge enzyme-like 18... 0.02 Orthogroups_2024-Update
Brara.D02108.1 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor 0.03 Orthogroups_2024-Update
Brara.I01843.1 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor 0.04 Orthogroups_2024-Update
Brara.I01844.1 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor 0.04 Orthogroups_2024-Update
Glyma.15G132800 No alias FAD-binding Berberine family protein 0.03 Orthogroups_2024-Update
MA_5468901g0010 No alias (at5g44400 : 157.0) FAD-binding Berberine family... 0.03 Orthogroups_2024-Update
MA_613919g0010 No alias (at5g44390 : 411.0) FAD-binding Berberine family... 0.02 Orthogroups_2024-Update
PSME_00002246-RA No alias (at5g44400 : 385.0) FAD-binding Berberine family... 0.03 Orthogroups_2024-Update
PSME_00002247-RA No alias (at5g44400 : 388.0) FAD-binding Berberine family... 0.02 Orthogroups_2024-Update
Potri.011G158400 No alias FAD-binding Berberine family protein 0.05 Orthogroups_2024-Update
Sopen02g019230 No alias FAD binding domain 0.02 Orthogroups_2024-Update
Sopen02g024250 No alias Reverse transcriptase (RNA-dependent DNA polymerase) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA InterProScan predictions
MF GO:0050660 flavin adenine dinucleotide binding IEA InterProScan predictions
BP GO:0055114 oxidation-reduction process IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR012951 BBE 469 526
IPR006094 Oxid_FAD_bind_N 77 213
No external refs found!