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  5. Potri.001G466066

Potri.001G466066


Description : Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG_42_0000001 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.001G466066
Cluster HCCA clusters: cluster_0035

Target Alias Description ECC score Gene Family Method Actions
A4A49_26813 No alias putative pentatricopeptide repeat-containing protein,... 0.03 Orthogroups_2024-Update
A4A49_36693 No alias pentatricopeptide repeat-containing protein 0.03 Orthogroups_2024-Update
A4A49_38131 No alias pentatricopeptide repeat-containing protein 0.06 Orthogroups_2024-Update
At3g49170 No alias Pentatricopeptide repeat-containing protein At3g49170,... 0.02 Orthogroups_2024-Update
At3g63370 No alias Pentatricopeptide repeat-containing protein At3g63370,... 0.04 Orthogroups_2024-Update
At4g18750 No alias Pentatricopeptide repeat-containing protein DOT4,... 0.02 Orthogroups_2024-Update
Bradi1g00381 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 Orthogroups_2024-Update
Bradi2g13297 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Orthogroups_2024-Update
Bradi4g30190 No alias pentatricopeptide (PPR) repeat-containing protein 0.02 Orthogroups_2024-Update
Brara.E02827.1 No alias RNA editing factor *(MEF22) 0.03 Orthogroups_2024-Update
GRMZM2G029859 No alias dynamin-like protein 6 0.03 Orthogroups_2024-Update
GRMZM2G031588 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 Orthogroups_2024-Update
GRMZM2G040947 No alias pentatricopeptide (PPR) repeat-containing protein 0.04 Orthogroups_2024-Update
GRMZM2G103078 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 Orthogroups_2024-Update
GRMZM2G144071 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Orthogroups_2024-Update
GRMZM2G163359 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 Orthogroups_2024-Update
GRMZM2G168378 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Orthogroups_2024-Update
GRMZM2G430710 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Orthogroups_2024-Update
GRMZM2G440349 No alias pentatricopeptide (PPR) repeat-containing protein 0.03 Orthogroups_2024-Update
GRMZM5G862936 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Orthogroups_2024-Update
Glyma.02G043900 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.13G313300 No alias Pentatricopeptide repeat (PPR-like) superfamily protein 0.03 Orthogroups_2024-Update
Glyma.17G117001 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.20G154600 No alias Pentatricopeptide repeat (PPR-like) superfamily protein 0.03 Orthogroups_2024-Update
HORVU0Hr1G001760.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU0Hr1G009930.2 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU2Hr1G029200.4 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU5Hr1G056450.2 No alias Unknown function 0.02 Orthogroups_2024-Update
LOC_Os03g13830 No alias pentatricopeptide, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os03g60200 No alias pentatricopeptide, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os06g02200 No alias pentatricopeptide, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os08g38610 No alias pentatricopeptide, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os10g34720 No alias LOI1, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os10g39460 No alias selenium-binding protein-like, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os12g36620 No alias pentatricopeptide, putative, expressed 0.02 Orthogroups_2024-Update
MA_122899g0010 No alias (at3g57430 : 674.0) Encodes a chloroplast RNA editing... 0.03 Orthogroups_2024-Update
MA_68707g0010 No alias (at3g24000 : 546.0) Tetratricopeptide repeat (TPR)-like... 0.04 Orthogroups_2024-Update
MA_771696g0010 No alias (at1g20230 : 490.0) Pentatricopeptide repeat (PPR)... 0.03 Orthogroups_2024-Update
MA_86894g0010 No alias (at3g12770 : 643.0) Encodes a pentatricopeptide repeat... 0.03 Orthogroups_2024-Update
MA_97789g0010 No alias (at3g26540 : 452.0) Tetratricopeptide repeat (TPR)-like... 0.03 Orthogroups_2024-Update
PSME_00015055-RA No alias (at1g11290 : 619.0) Pentatricopeptide Repeat Protein... 0.03 Orthogroups_2024-Update
PSME_00017551-RA No alias (at4g18750 : 421.0) Encodes a pentatricopeptide (PPR)... 0.02 Orthogroups_2024-Update
PSME_00018763-RA No alias (at1g11290 : 389.0) Pentatricopeptide Repeat Protein... 0.02 Orthogroups_2024-Update
PSME_00054674-RA No alias (at4g33170 : 289.0) Tetratricopeptide repeat (TPR)-like... 0.02 Orthogroups_2024-Update
PSME_00057098-RA No alias (at2g13600 : 538.0) Pentatricopeptide repeat (PPR)... 0.02 Orthogroups_2024-Update
Seita.2G031700.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.005G020000.7 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.007G201400.1 No alias RNA editing factor *(DOT4) 0.03 Orthogroups_2024-Update
Solyc03g116000 No alias Pentatricopeptide repeat-containing protein (AHRD V3.3... 0.02 Orthogroups_2024-Update
Solyc11g017290 No alias Pentatricopeptide repeat-containing protein (AHRD V3.3... 0.03 Orthogroups_2024-Update
Sopen04g022860 No alias PPR repeat family 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 515 563
IPR002885 Pentatricopeptide_repeat 214 256
IPR002885 Pentatricopeptide_repeat 413 460
IPR032867 DYW_dom 691 813
IPR002885 Pentatricopeptide_repeat 114 138
IPR002885 Pentatricopeptide_repeat 314 343
IPR002885 Pentatricopeptide_repeat 186 209
IPR002885 Pentatricopeptide_repeat 286 312
IPR002885 Pentatricopeptide_repeat 591 614
No external refs found!