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  5. Potri.002G014432

Potri.002G014432


Description : Pseudouridine synthase family protein


Gene families : OG_42_0004796 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004796_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.002G014432
Cluster HCCA clusters: cluster_0009

Target Alias Description ECC score Gene Family Method Actions
At1g20370 No alias F14O10.3 protein [Source:UniProtKB/TrEMBL;Acc:Q9LN29] 0.03 Orthogroups_2024-Update
Bradi3g51240 No alias Pseudouridine synthase family protein 0.04 Orthogroups_2024-Update
PSME_00048393-RA No alias (at1g20370 : 464.0) Pseudouridine synthase family... 0.03 Orthogroups_2024-Update
Seita.1G266700.1 No alias TruA-type tRNA pseudouridine synthase & EC_5.4... 0.04 Orthogroups_2024-Update
Sobic.004G287100.1 No alias TruA-type tRNA pseudouridine synthase & EC_5.4... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEA InterProScan predictions
MF GO:0003723 RNA binding IEA InterProScan predictions
BP GO:0009451 RNA modification IEA InterProScan predictions
MF GO:0009982 pseudouridine synthase activity IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR020097 PsdUridine_synth_TruA_a/b_dom 63 166
No external refs found!