Description : Pentatricopeptide repeat (PPR) superfamily protein
Gene families : OG_42_0000001 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Populus release: Potri.002G027800 | |
Cluster | HCCA clusters: cluster_0002 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
At5g59200 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.02 | Orthogroups_2024-Update | |
Bradi2g22840 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.02 | Orthogroups_2024-Update | |
Bradi3g36470 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
Brara.F00971.1 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
Brara.G00509.1 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
Brara.H02506.1 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
GRMZM2G001466 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
GRMZM2G163396 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
Glyma.07G249400 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
Glyma.09G086600 | No alias | Pentatricopeptide repeat (PPR-like) superfamily protein | 0.03 | Orthogroups_2024-Update | |
HORVU5Hr1G071640.4 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
HORVU7Hr1G111860.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
LOC_Os01g51810 | No alias | pentatricopeptide, putative, expressed | 0.02 | Orthogroups_2024-Update | |
LOC_Os01g72930 | No alias | pentatricopeptide, putative, expressed | 0.02 | Orthogroups_2024-Update | |
Seita.9G355700.1 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
Sobic.001G478900.2 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
Sobic.002G200500.3 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
Sobic.004G266300.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
Sobic.005G020000.7 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
Sobic.009G116400.4 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
Solyc10g008590 | No alias | Pentatricopeptide repeat-containing protein, putative... | 0.03 | Orthogroups_2024-Update | |
Sopen01g002910 | No alias | PPR repeat | 0.03 | Orthogroups_2024-Update | |
Sopen01g033110 | No alias | PPR repeat | 0.03 | Orthogroups_2024-Update | |
Sopen02g025050 | No alias | PPR repeat family | 0.03 | Orthogroups_2024-Update | |
Sopen02g033370 | No alias | PPR repeat family | 0.04 | Orthogroups_2024-Update | |
Sopen02g038750 | No alias | PPR repeat | 0.03 | Orthogroups_2024-Update | |
Sopen03g029160 | No alias | PPR repeat family | 0.05 | Orthogroups_2024-Update | |
Sopen06g022100 | No alias | PPR repeat family | 0.03 | Orthogroups_2024-Update | |
Sopen06g035950 | No alias | PPR repeat family | 0.02 | Orthogroups_2024-Update | |
Sopen09g004700 | No alias | PPR repeat | 0.04 | Orthogroups_2024-Update | |
Sopen11g001900 | No alias | PPR repeat | 0.02 | Orthogroups_2024-Update | |
Sopen11g024970 | No alias | PPR repeat family | 0.03 | Orthogroups_2024-Update | |
Sopen11g029050 | No alias | PPR repeat family | 0.03 | Orthogroups_2024-Update | |
evm.model.tig00001038.5 | No alias | no hits & (original description: no original description) | 0.01 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0008270 | zinc ion binding | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No Predicted GO terms available for this sequence |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR032867 | DYW_dom | 663 | 787 |
IPR002885 | Pentatricopeptide_repeat | 557 | 588 |
IPR002885 | Pentatricopeptide_repeat | 111 | 158 |
IPR002885 | Pentatricopeptide_repeat | 255 | 300 |
IPR002885 | Pentatricopeptide_repeat | 490 | 537 |
IPR002885 | Pentatricopeptide_repeat | 392 | 421 |
IPR002885 | Pentatricopeptide_repeat | 360 | 390 |
IPR002885 | Pentatricopeptide_repeat | 332 | 358 |
IPR002885 | Pentatricopeptide_repeat | 225 | 247 |
No external refs found! |