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  5. Potri.002G055400

Potri.002G055400


Description : phytochrome interacting factor 4


Gene families : OG_42_0000449 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000449_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.002G055400
Cluster HCCA clusters: cluster_0001

Target Alias Description ECC score Gene Family Method Actions
A4A49_09791 No alias transcription factor pif3 0.03 Orthogroups_2024-Update
At2g43010 No alias phytochrome interacting factor 4 [Source:TAIR;Acc:AT2G43010] 0.03 Orthogroups_2024-Update
Brara.C04242.1 No alias bHLH-type transcription factor 0.03 Orthogroups_2024-Update
Brara.H01713.1 No alias bHLH-type transcription factor 0.03 Orthogroups_2024-Update
GRMZM2G030744 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
GRMZM2G115960 No alias phytochrome interacting factor 3 0.02 Orthogroups_2024-Update
Glyma.08G303900 No alias phytochrome interacting factor 4 0.03 Orthogroups_2024-Update
Glyma.11G054600 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
HORVU5Hr1G093310.11 No alias regulatory protein *(PIF) of red/far-red light... 0.02 Orthogroups_2024-Update
LOC_Os06g06900 No alias helix-loop-helix DNA-binding domain containing protein, expressed 0.03 Orthogroups_2024-Update
Seita.3G384900.1 No alias regulatory protein *(PIF) of red/far-red light... 0.03 Orthogroups_2024-Update
Sobic.001G158900.3 No alias regulatory protein *(PIF) of red/far-red light... 0.02 Orthogroups_2024-Update
Sobic.008G163700.3 No alias regulatory protein *(PIF) of red/far-red light... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR011598 bHLH_dom 335 381
No external refs found!