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  5. Sopen11g027630

Sopen11g027630


Description : U-box domain


Gene families : OG_42_0000112 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000112_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen11g027630
Cluster HCCA clusters: Cluster_289

Target Alias Description ECC score Gene Family Method Actions
104879 No alias plant U-box 25 0.02 Orthogroups_2024-Update
GRMZM2G055052 No alias CYS, MET, PRO, and GLY protein 1 0.02 Orthogroups_2024-Update
GRMZM5G855994 No alias ARM repeat superfamily protein 0.02 Orthogroups_2024-Update
Glyma.12G188900 No alias plant U-box 23 0.02 Orthogroups_2024-Update
HORVU2Hr1G076470.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.1G278900.1 No alias E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Sobic.003G367000.1 No alias E3 ubiquitin ligase 0.04 Orthogroups_2024-Update
Solyc06g074140 No alias LOW QUALITY:U-box domain-containing family protein (AHRD... 0.03 Orthogroups_2024-Update
Solyc11g006030 No alias U-box domain-containing family protein (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEA InterProScan predictions
BP GO:0016567 protein ubiquitination IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003613 Ubox_domain 6 77
No external refs found!