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  5. Potri.002G072500

Potri.002G072500


Description : Pentatricopeptide repeat (PPR-like) superfamily protein


Gene families : OG_42_0004020 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004020_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.002G072500
Cluster HCCA clusters: cluster_0002

Target Alias Description ECC score Gene Family Method Actions
Brara.D01246.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Glyma.12G030500 No alias Pentatricopeptide repeat (PPR-like) superfamily protein 0.03 Orthogroups_2024-Update
Sobic.002G267600.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc01g100340 No alias Pentatricopeptide repeat-containing protein (AHRD V3.3... 0.03 Orthogroups_2024-Update
Solyc09g075170 No alias Pentatricopeptide repeat (PPR) superfamily protein (AHRD... 0.04 Orthogroups_2024-Update
Sopen01g042040 No alias PPR repeat family 0.04 Orthogroups_2024-Update
Sopen01g043860 No alias PPR repeat family 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 201 234
IPR002885 Pentatricopeptide_repeat 364 412
IPR002885 Pentatricopeptide_repeat 264 311
IPR002885 Pentatricopeptide_repeat 137 166
IPR002885 Pentatricopeptide_repeat 439 463
IPR002885 Pentatricopeptide_repeat 171 195
IPR002885 Pentatricopeptide_repeat 236 260
IPR002885 Pentatricopeptide_repeat 41 70
No external refs found!