1. Home
  2. Species
  3. Populus trichocarpa
  4. Sequence
  5. Potri.002G077300

Potri.002G077300


Description : Calcium-binding EF-hand family protein


Gene families : OG_42_0000821 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000821_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.002G077300
Cluster HCCA clusters: cluster_0046

Target Alias Description ECC score Gene Family Method Actions
A4A49_23290 No alias putative calcium-binding protein cml44 0.05 Orthogroups_2024-Update
A4A49_27262 No alias calmodulin-like protein 3 0.03 Orthogroups_2024-Update
At3g07490 No alias CML3 [Source:UniProtKB/TrEMBL;Acc:A0A178V7U1] 0.04 Orthogroups_2024-Update
At4g12860 No alias UNE14 [Source:UniProtKB/TrEMBL;Acc:A0A178UUX0] 0.03 Orthogroups_2024-Update
Cre03.g210177 No alias calmodulin 1 0.01 Orthogroups_2024-Update
Glyma.13G344200 No alias ARF-GAP domain 11 0.04 Orthogroups_2024-Update
MA_393053g0010 No alias (at3g07490 : 116.0) A member of ARF GAP domain (AGD), A... 0.03 Orthogroups_2024-Update
MA_6883323g0010 No alias (at3g07490 : 102.0) A member of ARF GAP domain (AGD), A... 0.06 Orthogroups_2024-Update
Mp6g20440.1 No alias Probable calcium-binding protein CML22 OS=Oryza sativa... 0.03 Orthogroups_2024-Update
Sobic.006G131600.1 No alias calcium sensor *(CML) 0.05 Orthogroups_2024-Update
Sobic.008G079200.2 No alias calcium sensor *(CML) 0.03 Orthogroups_2024-Update
Solyc06g083000 No alias Calcium-binding protein (AHRD V3.3 *** Q9SCA1_LOTJA) 0.03 Orthogroups_2024-Update
Sopen04g026060 No alias EF hand 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 92 155
IPR002048 EF_hand_dom 12 28
No external refs found!