Sopen11g027900

Description : MIZ/SP-RING zinc finger

Gene families : OG_42_0001670 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001670_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen11g027900
Cluster	HCCA clusters: Cluster_229

Target	Alias	Description	ECC score	Gene Family Method	Actions
Sobic.009G026500.1	No alias	E3 SUMO ubiquitin ligase *(SIZ1)	0.02	Orthogroups_2024-Update
Solyc11g069160	No alias	SUMO E3 ligase SIZ1 (AHRD V3.3 *** A0A0X9AQ43_SOLLC)	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	IEA	InterProScan predictions
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR004181	Znf_MIZ	365	413
IPR019787	Znf_PHD-finger	118	172
IPR003034	SAP_dom	14	42

External Links

No external refs found!