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  5. Potri.002G088300

Potri.002G088300


Description : Ribosomal protein S13/S18 family


Gene families : OG_42_0004280 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004280_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.002G088300
Cluster HCCA clusters: cluster_0030

Target Alias Description ECC score Gene Family Method Actions
Bradi1g10990 No alias Ribosomal protein S13/S18 family 0.04 Orthogroups_2024-Update
Brara.C00617.1 No alias component *(uS13c) of small plastid ribosomal-subunit proteome 0.04 Orthogroups_2024-Update
Brara.J02025.1 No alias component *(uS13c) of small plastid ribosomal-subunit proteome 0.04 Orthogroups_2024-Update
Cre12.g493950 No alias Ribosomal protein S13/S18 family 0.06 Orthogroups_2024-Update
GRMZM2G153476 No alias Ribosomal protein S13/S18 family 0.02 Orthogroups_2024-Update
Kfl00859_0050 kfl00859_0050_v1.1 (at5g14320 : 143.0) Ribosomal protein S13/S18 family;... 0.03 Orthogroups_2024-Update
LOC_Os03g49710 No alias ribosomal protein S13p/S18e, putative, expressed 0.03 Orthogroups_2024-Update
MA_10431241g0010 No alias (at5g14320 : 217.0) Ribosomal protein S13/S18 family;... 0.04 Orthogroups_2024-Update
Mp1g18230.1 No alias component mtRPS13|psRPS13 of small ribosomal subunit... 0.04 Orthogroups_2024-Update
Pp1s258_19V6 No alias 30s ribosomal protein s13 0.07 Orthogroups_2024-Update
Seita.9G124300.1 No alias component *(uS13c) of small plastid ribosomal-subunit proteome 0.07 Orthogroups_2024-Update
Seita.9G124400.1 No alias component *(uS13c) of small plastid ribosomal-subunit proteome 0.09 Orthogroups_2024-Update
Sobic.001G122400.1 No alias component *(uS13c) of small plastid ribosomal-subunit proteome 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA InterProScan predictions
MF GO:0003735 structural constituent of ribosome IEA InterProScan predictions
CC GO:0005622 intracellular IEA InterProScan predictions
CC GO:0005840 ribosome IEA InterProScan predictions
BP GO:0006412 translation IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001892 Ribosomal_S13 48 152
No external refs found!