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  5. Sopen11g027970

Sopen11g027970


Description : Zinc finger, C2H2 type


Gene families : OG_42_0000119 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000119_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen11g027970
Cluster HCCA clusters: Cluster_232

Target Alias Description ECC score Gene Family Method Actions
A4A49_07606 No alias protein shoot gravitropism 5 0.02 Orthogroups_2024-Update
At1g25250 No alias IDD16 [Source:UniProtKB/TrEMBL;Acc:A0A178WG74] 0.03 Orthogroups_2024-Update
At2g02070 No alias Protein indeterminate-domain 5, chloroplastic... 0.03 Orthogroups_2024-Update
Bradi1g68730 No alias indeterminate(ID)-domain 14 0.02 Orthogroups_2024-Update
Bradi5g18530 No alias indeterminate(ID)-domain 4 0.02 Orthogroups_2024-Update
Brara.F03436.1 No alias C2H2 subclass IDD transcription factor 0.04 Orthogroups_2024-Update
GRMZM2G320287 No alias indeterminate(ID)-domain 2 0.03 Orthogroups_2024-Update
Glyma.01G176600 No alias C2H2-like zinc finger protein 0.03 Orthogroups_2024-Update
Glyma.02G153900 No alias indeterminate(ID)-domain 2 0.04 Orthogroups_2024-Update
Glyma.10G029700 No alias indeterminate(ID)-domain 12 0.06 Orthogroups_2024-Update
MA_12028g0010 No alias (at2g01940 : 315.0) May be involved in an early event in... 0.03 Orthogroups_2024-Update
Pp1s43_228V6 No alias nucleic acid binding 0.03 Orthogroups_2024-Update
Seita.5G002400.1 No alias C2H2 subclass IDD transcription factor 0.02 Orthogroups_2024-Update
Seita.5G137700.1 No alias C2H2 subclass IDD transcription factor 0.03 Orthogroups_2024-Update
Seita.6G247000.1 No alias C2H2 subclass IDD transcription factor 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR013087 Znf_C2H2_type 75 97
No external refs found!