Potri.002G100200


Description : Histone superfamily protein


Gene families : OG_42_0000090 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000090_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.002G100200
Cluster HCCA clusters: cluster_0052

Target Alias Description ECC score Gene Family Method Actions
103546 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
438193 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
Bradi1g49990 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Bradi4g07840 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Cre06.g274101 No alias Histone superfamily protein 0.01 Orthogroups_2024-Update
HORVU7Hr1G029190.1 No alias histone *(H3) 0.03 Orthogroups_2024-Update
HORVU7Hr1G033030.1 No alias histone *(H3) 0.02 Orthogroups_2024-Update
Kfl00417_0090 kfl00417_0090_v1.1 (at5g10980 : 254.0) Histone superfamily protein;... 0.01 Orthogroups_2024-Update
MA_56411g0010 No alias (at5g65360 : 262.0) Histone superfamily protein;... 0.02 Orthogroups_2024-Update
PSME_00010790-RA No alias (at5g65360 : 186.0) Histone superfamily protein;... 0.03 Orthogroups_2024-Update
PSME_00020261-RA No alias (at5g10980 : 95.9) Histone superfamily protein;... 0.03 Orthogroups_2024-Update
Potri.014G096400 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Solyc05g051500 No alias WEB family protein, chloroplastic (AHRD V3.3 *-*... 0.03 Orthogroups_2024-Update
Sopen01g032420 No alias Core histone H2A/H2B/H3/H4 0.02 Orthogroups_2024-Update
Sopen01g033540 No alias Core histone H2A/H2B/H3/H4 0.02 Orthogroups_2024-Update
Sopen10g004700 No alias Core histone H2A/H2B/H3/H4 0.03 Orthogroups_2024-Update
Sopen12g029140 No alias Core histone H2A/H2B/H3/H4 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEA InterProScan predictions
MF GO:0003677 DNA binding IEA InterProScan predictions
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 1 132
No external refs found!