Sopen11g028070

Description : RING-variant domain

Gene families : OG_42_0001073 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001073_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen11g028070
Cluster	HCCA clusters: Cluster_390

Target	Alias	Description	ECC score	Gene Family Method
At5g03180	No alias	RING/U-box superfamily protein...	0.04	Orthogroups_2024-Update
Brara.B01021.1	No alias	E3 ubiquitin ligase	0.03	Orthogroups_2024-Update
Glyma.12G068000	No alias	RING/U-box superfamily protein	0.02	Orthogroups_2024-Update
Glyma.12G173351	No alias	RING/U-box superfamily protein	0.04	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	IEA	InterProScan predictions
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR011016	Znf_RING-CH	273	320

External Links

No external refs found!