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  5. Potri.002G110300

Potri.002G110300


Description : Rhamnogalacturonate lyase family protein


Gene families : OG_42_0000589 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000589_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.002G110300
Cluster HCCA clusters: cluster_0031

Target Alias Description ECC score Gene Family Method Actions
A4A49_08177 No alias hypothetical protein 0.05 Orthogroups_2024-Update
A4A49_40794 No alias hypothetical protein 0.04 Orthogroups_2024-Update
Brara.F00647.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Mp2g13570.1 No alias no hits & (original description: none) 0.02 Orthogroups_2024-Update
Potri.006G218500 No alias Rhamnogalacturonate lyase family protein 0.03 Orthogroups_2024-Update
Pp1s117_149V6 No alias lg27 30-like gene 0.02 Orthogroups_2024-Update
Seita.6G247100.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.008G016500.1 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR010325 Rhamnogal_lyase 4 203
IPR029411 RG-lyase_III 444 630
IPR029413 RG-lyase_II 358 429
No external refs found!