Potri.002G124200

Description : poly(A) binding protein 8

Gene families : OG_42_0000711 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000711_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Populus release: Potri.002G124200
Cluster	HCCA clusters: cluster_0096

Target	Alias	Description	ECC score	Gene Family Method
Bradi4g08430	No alias	poly(A) binding protein 8	0.04	Orthogroups_2024-Update
Brara.D01391.1	No alias	mRNA poly-A-tail binding factor *(PABP)	0.05	Orthogroups_2024-Update
Brara.F00361.1	No alias	mRNA poly-A-tail binding factor *(PABP)	0.03	Orthogroups_2024-Update
HORVU5Hr1G050560.1	No alias	mRNA poly-A-tail binding factor *(PABP)	0.02	Orthogroups_2024-Update
Mp7g18970.1	No alias	mRNA poly-A-tail binding factor (PABP)	0.03	Orthogroups_2024-Update
Solyc12g088720	No alias	Polyadenylate-binding protein (AHRD V3.3 *** K4DGU3_SOLLC)	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	InterProScan predictions
MF	GO:0003723	RNA binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR002004	PABP_HYD	558	624
IPR000504	RRM_dom	121	189
IPR000504	RRM_dom	212	280
IPR000504	RRM_dom	33	103
IPR000504	RRM_dom	314	382

External Links

No external refs found!