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  5. Sopen11g028290

Sopen11g028290


Description : Ion transport protein


Gene families : OG_42_0000108 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000108_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen11g028290
Cluster HCCA clusters: Cluster_15

Target Alias Description ECC score Gene Family Method Actions
A4A49_08512 No alias putative cyclic nucleotide-gated ion channel 20, chloroplastic 0.02 Orthogroups_2024-Update
A4A49_26569 No alias putative cyclic nucleotide-gated ion channel 16 0.02 Orthogroups_2024-Update
At2g46450 No alias Probable cyclic nucleotide-gated ion channel 12... 0.03 Orthogroups_2024-Update
Brara.B01426.1 No alias cyclic nucleotide-gated cation channel *(CNGC) 0.02 Orthogroups_2024-Update
Brara.I04465.1 No alias cyclic nucleotide-gated cation channel *(CNGC) 0.03 Orthogroups_2024-Update
Glyma.09G168500 No alias cyclic nucleotide-binding transporter 1 0.02 Orthogroups_2024-Update
Glyma.17G073500 No alias cyclic nucleotide gated channel 5 0.03 Orthogroups_2024-Update
HORVU1Hr1G066020.1 No alias cyclic nucleotide-gated cation channel *(CNGC) 0.04 Orthogroups_2024-Update
HORVU5Hr1G065950.1 No alias cyclic nucleotide-gated cation channel *(CNGC) 0.03 Orthogroups_2024-Update
LOC_Os02g41710 No alias cyclic nucleotide-gated ion channel, putative, expressed 0.02 Orthogroups_2024-Update
MA_10431327g0020 No alias (at5g54250 : 177.0) member of Cyclic nucleotide gated... 0.02 Orthogroups_2024-Update
Potri.001G043900 No alias cyclic nucleotide gated channel 8 0.03 Orthogroups_2024-Update
Potri.004G212300 No alias cyclic nucleotide-gated channel 15 0.02 Orthogroups_2024-Update
Pp1s183_83V6 No alias cyclic nucleotide and calmodulin-regulated ion channel 0.02 Orthogroups_2024-Update
Seita.1G240900.1 No alias cyclic nucleotide-gated cation channel *(CNGC) 0.03 Orthogroups_2024-Update
Solyc03g007250 No alias Cyclic nucleotide gated channel CNGC6 (AHRD V3.3 *-*... 0.03 Orthogroups_2024-Update
Solyc03g007260 No alias Cyclic nucleotide gated channel CNGC6 (AHRD V3.3 ***... 0.02 Orthogroups_2024-Update
Solyc11g069580 No alias Cyclic nucleotide-gated channel (AHRD V3.3 *** A0A0K9PRG4_ZOSMR) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEA InterProScan predictions
BP GO:0006811 ion transport IEA InterProScan predictions
CC GO:0016020 membrane IEA InterProScan predictions
BP GO:0055085 transmembrane transport IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR005821 Ion_trans_dom 90 409
No external refs found!