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  5. Potri.002G126300

Potri.002G126300


Description : alpha-amylase-like


Gene families : OG_42_0000605 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000605_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.002G126300
Cluster HCCA clusters: cluster_0066

Target Alias Description ECC score Gene Family Method Actions
Brara.A02054.1 No alias alpha amylase 0.03 Orthogroups_2024-Update
Brara.G03409.1 No alias alpha amylase 0.03 Orthogroups_2024-Update
Glyma.11G153301 No alias alpha-amylase-like 3 0.05 Orthogroups_2024-Update
Kfl00228_0110 kfl00228_0110_v1.1 (p04063|amy2_horvu : 536.0) Alpha-amylase type B isozyme... 0.02 Orthogroups_2024-Update
Mp2g22120.1 No alias alpha amylase 0.02 Orthogroups_2024-Update
Seita.8G179800.1 No alias alpha amylase 0.03 Orthogroups_2024-Update
Sobic.006G063600.1 No alias alpha amylase 0.02 Orthogroups_2024-Update
Solyc05g007070 No alias No description available 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA InterProScan predictions
MF GO:0004556 alpha-amylase activity IEA InterProScan predictions
MF GO:0005509 calcium ion binding IEA InterProScan predictions
BP GO:0005975 carbohydrate metabolic process IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR012850 A-amylase_bs_C 364 420
IPR006047 Glyco_hydro_13_cat_dom 52 207
No external refs found!