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  5. Potri.002G131300

Potri.002G131300


Description : IBR domain-containing protein


Gene families : OG_42_0000347 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000347_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.002G131300
Cluster HCCA clusters: cluster_0120

Target Alias Description ECC score Gene Family Method Actions
Bradi1g14425 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Brara.B01625.1 No alias RBR-Ariadne-class E3 ubiquitin ligase 0.05 Orthogroups_2024-Update
Brara.G00341.1 No alias RBR-Ariadne-class E3 ubiquitin ligase 0.04 Orthogroups_2024-Update
HORVU2Hr1G085060.2 No alias RBR-Ariadne-class E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Potri.002G131200 No alias IBR domain-containing protein 0.03 Orthogroups_2024-Update
Potri.010G180600 No alias IBR domain-containing protein 0.02 Orthogroups_2024-Update
Pp1s178_72V6 No alias protein ariadne- 0.02 Orthogroups_2024-Update
Seita.9G483400.1 No alias RBR-Ariadne-class E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Sobic.005G208900.1 No alias RBR-Ariadne-class E3 ubiquitin ligase 0.04 Orthogroups_2024-Update
Sobic.006G131000.1 No alias RBR-Ariadne-class E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Sopen11g004370 No alias IBR domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR018957 Znf_C3HC4_RING-type 109 140
IPR002867 IBR_dom 261 306
IPR002867 IBR_dom 178 240
IPR001876 Znf_RanBP2 583 604
No external refs found!