Potri.002G133000

Description : RING/U-box superfamily protein

Gene families : OG_42_0000548 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000548_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Populus release: Potri.002G133000
Cluster	HCCA clusters: cluster_0029

Target	Alias	Description	ECC score	Gene Family Method
Brara.D01417.1	No alias	E3 ubiquitin ligase *(RMA/MUSE)	0.05	Orthogroups_2024-Update
GRMZM2G149028	No alias	RING/U-box superfamily protein	0.04	Orthogroups_2024-Update
Glyma.07G196000	No alias	RING membrane-anchor 1	0.03	Orthogroups_2024-Update
Glyma.12G112000	No alias	RING membrane-anchor 1	0.05	Orthogroups_2024-Update
LOC_Os04g44820	No alias	zinc finger, C3HC4 type domain containing protein, expressed	0.04	Orthogroups_2024-Update
Sobic.006G157500.1	No alias	E3 ubiquitin ligase *(RMA/MUSE)	0.05	Orthogroups_2024-Update
Sopen02g023160	No alias	Zinc finger, C3HC4 type (RING finger)	0.04	Orthogroups_2024-Update
Sopen07g031390	No alias	Zinc finger, C3HC4 type (RING finger)	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	IEA	InterProScan predictions

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR018957	Znf_C3HC4_RING-type	32	72

External Links

No external refs found!