Sopen11g028390

Description : Associated with HOX

Gene families : OG_42_0000158 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000158_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen11g028390
Cluster	HCCA clusters: Cluster_63

Target	Alias	Description	ECC score	Gene Family Method
Bradi2g23530	No alias	POX (plant homeobox) family protein	0.02	Orthogroups_2024-Update
GRMZM2G327059	No alias	POX (plant homeobox) family protein	0.03	Orthogroups_2024-Update
Glyma.06G029100	No alias	BEL1-like homeodomain 3	0.03	Orthogroups_2024-Update
Glyma.12G094800	No alias	BEL1-like homeodomain 1	0.03	Orthogroups_2024-Update
Glyma.19G199500	No alias	BEL1-like homeodomain 1	0.02	Orthogroups_2024-Update
LOC_Os12g43950	No alias	homeobox domain containing protein, expressed	0.02	Orthogroups_2024-Update
Solyc04g080790	No alias	BEL1-like homeodomain protein 3, putative (AHRD V3.3 ***...	0.02	Orthogroups_2024-Update
Sopen04g034380	No alias	Associated with HOX	0.04	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR008422	Homeobox_KN_domain	475	514
IPR006563	POX_dom	258	397

External Links

No external refs found!

Sopen11g028390

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation