Potri.002G139700

Description : RNA-binding (RRM/RBD/RNP motifs) family protein

Gene families : OG_42_0001272 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001272_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Populus release: Potri.002G139700
Cluster	HCCA clusters: cluster_0164

Target	Alias	Description	ECC score	Gene Family Method
At2g44710	No alias	At2g44720/F16B22.21 [Source:UniProtKB/TrEMBL;Acc:Q8RWQ1]	0.03	Orthogroups_2024-Update
Bradi1g28670	No alias	RNA-binding (RRM/RBD/RNP motifs) family protein	0.02	Orthogroups_2024-Update
Glyma.02G049800	No alias	RNA-binding (RRM/RBD/RNP motifs) family protein	0.04	Orthogroups_2024-Update
MA_10436637g0030	No alias	(at2g44710 : 434.0) RNA-binding (RRM/RBD/RNP motifs)...	0.02	Orthogroups_2024-Update
MA_169053g0010	No alias	(at2g44710 : 404.0) RNA-binding (RRM/RBD/RNP motifs)...	0.02	Orthogroups_2024-Update
MA_8142g0020	No alias	(at2g44710 : 362.0) RNA-binding (RRM/RBD/RNP motifs)...	0.03	Orthogroups_2024-Update
Pp1s327_24V6	No alias	rna binding	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR000504	RRM_dom	389	454
IPR000504	RRM_dom	212	280
IPR000504	RRM_dom	292	358

External Links

No external refs found!