Sopen11g028600

Description : NB-ARC domain

Gene families : OG_42_0000039 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000039_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen11g028600
Cluster	HCCA clusters: Cluster_367

Target	Alias	Description	ECC score	Gene Family Method
Brara.E02675.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
Glyma.03G048301	No alias	disease resistance protein (TIR-NBS-LRR class)	0.03	Orthogroups_2024-Update
Glyma.19G085932	No alias	LRR and NB-ARC domains-containing disease resistance protein	0.02	Orthogroups_2024-Update
HORVU1Hr1G000860.7	No alias	Unknown function	0.04	Orthogroups_2024-Update
HORVU1Hr1G068200.2	No alias	Unknown function	0.02	Orthogroups_2024-Update
LOC_Os03g63150	No alias	powdery mildew resistance protein PM3b, putative, expressed	0.02	Orthogroups_2024-Update
LOC_Os08g42930	No alias	disease resistance protein RGA1, putative, expressed	0.03	Orthogroups_2024-Update
Potri.004G198700	No alias	LRR and NB-ARC domains-containing disease resistance protein	0.03	Orthogroups_2024-Update
Potri.017G015400	No alias	LRR and NB-ARC domains-containing disease resistance protein	0.03	Orthogroups_2024-Update
Potri.T096100	No alias	LRR and NB-ARC domains-containing disease resistance protein	0.02	Orthogroups_2024-Update
Seita.8G244000.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Solyc02g084450	No alias	Disease resistance protein (AHRD V3.3 *** A0A124SFK9_CYNCS)	0.02	Orthogroups_2024-Update
Solyc11g069930	No alias	Disease resistance protein (AHRD V3.3 - B3IYJ6_CAPCH)	0.03	Orthogroups_2024-Update
Sopen11g028610	No alias	NB-ARC domain	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043531	ADP binding	IEA	InterProScan predictions
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR002182	NB-ARC	27	192

External Links

No external refs found!