Sopen11g028610

Description : NB-ARC domain

Gene families : OG_42_0000039 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000039_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen11g028610
Cluster	HCCA clusters: Cluster_112

Target	Alias	Description	ECC score	Gene Family Method
A4A49_23432	No alias	putative disease resistance protein rga3	0.03	Orthogroups_2024-Update
Glyma.03G048100	No alias	disease resistance protein (TIR-NBS-LRR class)	0.02	Orthogroups_2024-Update
Glyma.09G020700	No alias	NB-ARC domain-containing disease resistance protein	0.02	Orthogroups_2024-Update
Glyma.11G212800	No alias	LRR and NB-ARC domains-containing disease resistance protein	0.03	Orthogroups_2024-Update
Glyma.15G233400	No alias	LRR and NB-ARC domains-containing disease resistance protein	0.03	Orthogroups_2024-Update
Glyma.16G079400	No alias	LRR and NB-ARC domains-containing disease resistance protein	0.03	Orthogroups_2024-Update
Glyma.19G137200	No alias	LRR and NB-ARC domains-containing disease resistance protein	0.02	Orthogroups_2024-Update
HORVU1Hr1G005180.17	No alias	Unknown function	0.02	Orthogroups_2024-Update
HORVU7Hr1G002260.14	No alias	Unknown function	0.02	Orthogroups_2024-Update
HORVU7Hr1G002290.4	No alias	Unknown function	0.02	Orthogroups_2024-Update
Seita.3G195000.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
Sopen01g034940	No alias	NB-ARC domain	0.03	Orthogroups_2024-Update
Sopen11g028600	No alias	NB-ARC domain	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043531	ADP binding	IEA	InterProScan predictions
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR002182	NB-ARC	181	400

External Links

No external refs found!