Potri.002G162400


Description : Pectin lyase-like superfamily protein


Gene families : OG_42_0000259 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000259_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.002G162400
Cluster HCCA clusters: cluster_0010

Target Alias Description ECC score Gene Family Method Actions
Brara.A01388.1 No alias EC_3.2 glycosylase 0.03 Orthogroups_2024-Update
LOC_Os09g26800 No alias polygalacturonase, putative, expressed 0.02 Orthogroups_2024-Update
Potri.005G063400 No alias Pectin lyase-like superfamily protein 0.03 Orthogroups_2024-Update
Sopen06g020290 No alias Glycosyl hydrolases family 28 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEA InterProScan predictions
BP GO:0005975 carbohydrate metabolic process IEA InterProScan predictions
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000743 Glyco_hydro_28 132 420
No external refs found!