Potri.002G169800

Description : P-loop containing nucleoside triphosphate hydrolases superfamily protein

Gene families : OG_42_0002986 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002986_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Populus release: Potri.002G169800
Cluster	HCCA clusters: cluster_0036

Target	Alias	Description	ECC score	Gene Family Method
174634	No alias	P-loop containing nucleoside triphosphate hydrolases...	0.03	Orthogroups_2024-Update
At5g08610	No alias	PDE340 [Source:UniProtKB/TrEMBL;Acc:A0A178UFQ6]	0.05	Orthogroups_2024-Update
Bradi1g38660	No alias	P-loop containing nucleoside triphosphate hydrolases...	0.06	Orthogroups_2024-Update
Bradi2g43710	No alias	P-loop containing nucleoside triphosphate hydrolases...	0.04	Orthogroups_2024-Update
Brara.F02248.1	No alias	mRNA helicase *(RH31)	0.05	Orthogroups_2024-Update
Brara.J02411.1	No alias	mRNA helicase *(RH31)	0.03	Orthogroups_2024-Update
GRMZM2G156158	No alias	P-loop containing nucleoside triphosphate hydrolases...	0.03	Orthogroups_2024-Update
Glyma.07G056600	No alias	P-loop containing nucleoside triphosphate hydrolases...	0.03	Orthogroups_2024-Update
LOC_Os01g43130	No alias	DEAD/DEAH box helicase, putative, expressed	0.02	Orthogroups_2024-Update
LOC_Os06g33520	No alias	DEAD/DEAH box helicase, putative, expressed	0.02	Orthogroups_2024-Update
PSME_00013127-RA	No alias	(at5g63630 : 704.0) P-loop containing nucleoside...	0.02	Orthogroups_2024-Update
Seita.4G167800.1	No alias	mRNA helicase *(RH31)	0.05	Orthogroups_2024-Update
Seita.5G229000.1	No alias	mRNA helicase *(RH31)	0.04	Orthogroups_2024-Update
Sobic.010G153300.2	No alias	mRNA helicase *(RH31)	0.06	Orthogroups_2024-Update
Solyc01g095740	No alias	RNA helicase DEAD5	0.06	Orthogroups_2024-Update
Sopen01g039490	No alias	DEAD/DEAH box helicase	0.07	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	InterProScan predictions
MF	GO:0008144	drug binding	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001650	Helicase_C	537	643
IPR011545	DEAD/DEAH_box_helicase_dom	315	492

External Links

No external refs found!