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  5. Potri.002G170000

Potri.002G170000


Description : cyclic nucleotide gated channel 10


Gene families : OG_42_0000108 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000108_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.002G170000
Cluster HCCA clusters: cluster_0066

Target Alias Description ECC score Gene Family Method Actions
A4A49_17367 No alias cyclic nucleotide-gated ion channel 1 0.03 Orthogroups_2024-Update
A4A49_18102 No alias cyclic nucleotide-gated ion channel 1 0.04 Orthogroups_2024-Update
At2g24610 No alias cyclic nucleotide-gated channel 14 [Source:TAIR;Acc:AT2G24610] 0.04 Orthogroups_2024-Update
At2g46440 No alias Cyclic nucleotide-gated ion channel 11... 0.03 Orthogroups_2024-Update
At3g17700 No alias Probable cyclic nucleotide-gated ion channel 20,... 0.04 Orthogroups_2024-Update
At5g14870 No alias Cyclic nucleotide-gated ion channel 18... 0.03 Orthogroups_2024-Update
Bradi1g46260 No alias cyclic nucleotide-binding transporter 1 0.02 Orthogroups_2024-Update
Bradi5g23700 No alias cyclic nucleotide gated channel 5 0.02 Orthogroups_2024-Update
Brara.B01426.1 No alias cyclic nucleotide-gated cation channel *(CNGC) 0.03 Orthogroups_2024-Update
Brara.B01472.1 No alias cyclic nucleotide-gated cation channel *(CNGC) 0.03 Orthogroups_2024-Update
Brara.E02422.1 No alias cyclic nucleotide-gated cation channel *(CNGC) 0.03 Orthogroups_2024-Update
Brara.K00815.1 No alias cyclic nucleotide-gated cation channel *(CNGC) 0.02 Orthogroups_2024-Update
GRMZM2G074317 No alias Cyclic nucleotide-regulated ion channel family protein 0.03 Orthogroups_2024-Update
Glyma.06G184000 No alias cyclic nucleotide-gated channel 16 0.03 Orthogroups_2024-Update
Glyma.09G168500 No alias cyclic nucleotide-binding transporter 1 0.04 Orthogroups_2024-Update
Glyma.16G025400 No alias cyclic nucleotide-gated channel 13 0.02 Orthogroups_2024-Update
HORVU5Hr1G065950.1 No alias cyclic nucleotide-gated cation channel *(CNGC) 0.04 Orthogroups_2024-Update
Kfl00018_0440 kfl00018_0440_v1.1 (at4g30360 : 523.0) member of Cyclic nucleotide gated... 0.01 Orthogroups_2024-Update
LOC_Os03g55100 No alias cyclic nucleotide-gated ion channel 2, putative, expressed 0.02 Orthogroups_2024-Update
PSME_00005940-RA No alias (at5g15410 : 820.0) 'defense, no death' gene (DND1)... 0.02 Orthogroups_2024-Update
Potri.015G019100 No alias cyclic nucleotide gated channel 1 0.04 Orthogroups_2024-Update
Solyc03g098210 No alias Cyclic nucleotide gated channel CNGC15 (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Solyc05g050360 No alias cyclic nucleotide gated channel 1 (AHRD V3.3 *** AT5G53130.1) 0.04 Orthogroups_2024-Update
Sopen02g033280 No alias Cyclic nucleotide-binding domain 0.02 Orthogroups_2024-Update
Sopen06g017960 No alias Ion transport protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEA InterProScan predictions
BP GO:0006811 ion transport IEA InterProScan predictions
CC GO:0016020 membrane IEA InterProScan predictions
BP GO:0055085 transmembrane transport IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR005821 Ion_trans_dom 94 419
IPR000595 cNMP-bd_dom 513 605
No external refs found!