Potri.002G175000

Description : RNA-binding (RRM/RBD/RNP motifs) family protein

Gene families : OG_42_0001097 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001097_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Populus release: Potri.002G175000
Cluster	HCCA clusters: cluster_0097

Target	Alias	Description	ECC score	Gene Family Method
Sobic.004G020700.1	No alias	RNA splicing factor *(RS31/40/41)	0.01	Orthogroups_2024-Update
Solyc10g009330	No alias	Arginine/serine-rich splicing factor, putative (AHRD...	0.03	Orthogroups_2024-Update
Sopen03g005120	No alias	RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR000504	RRM_dom	96	158
IPR000504	RRM_dom	5	61

External Links

No external refs found!