1. Home
  2. Species
  3. Solanum pennellii
  4. Sequence
  5. Sopen11g028950

Sopen11g028950


Description : VHS domain


Gene families : OG_42_0000585 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000585_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen11g028950
Cluster HCCA clusters: Cluster_134

Target Alias Description ECC score Gene Family Method Actions
Bradi3g10150 No alias ENTH/VHS/GAT family protein 0.03 Orthogroups_2024-Update
GRMZM2G118363 No alias ENTH/VHS/GAT family protein 0.02 Orthogroups_2024-Update
HORVU3Hr1G088350.1 No alias ubiquitin adaptor protein *(TOL) 0.04 Orthogroups_2024-Update
LOC_Os02g17350 No alias VHS and GAT domain containing protein, expressed 0.03 Orthogroups_2024-Update
Potri.004G138600 No alias ENTH/VHS/GAT family protein 0.03 Orthogroups_2024-Update
Potri.016G131900 No alias ENTH/VHS/GAT family protein 0.02 Orthogroups_2024-Update
Seita.1G121600.1 No alias ubiquitin adaptor protein *(TOL) 0.03 Orthogroups_2024-Update
Solyc11g005460 No alias ENTH/VHS/GAT family protein (AHRD V3.3 *** AT5G63640.2) 0.02 Orthogroups_2024-Update
Solyc11g071270 No alias ENTH/VHS/GAT family protein (AHRD V3.3 *** A0A061GKP2_THECC) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0005622 intracellular IEA InterProScan predictions
BP GO:0006886 intracellular protein transport IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR004152 GAT_dom 191 264
IPR002014 VHS_dom 5 115
No external refs found!