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  5. Potri.002G190000

Potri.002G190000


Description : ubiquitin 6


Gene families : OG_42_0000048 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000048_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Populus release: Potri.002G190000
Cluster HCCA clusters: cluster_0170

Target Alias Description ECC score Gene Family Method Actions
93613 No alias related to ubiquitin 1 0.02 Orthogroups_2024-Update
At2g36170 No alias Ubiquitin-60S ribosomal protein L40-1... 0.03 Orthogroups_2024-Update
At3g52590 No alias Ubiquitin-60S ribosomal protein L40-1... 0.03 Orthogroups_2024-Update
Brara.G00981.1 No alias component *(eS31) of small ribosomal-subunit (SSU) proteome 0.03 Orthogroups_2024-Update
HORVU7Hr1G102840.1 No alias UBQ ubiquitin-fold protein 0.03 Orthogroups_2024-Update
Kfl00345_0130 kfl00345_0130_v1.... (at3g52590 : 254.0) Ubiquitin extension protein;... 0.01 Orthogroups_2024-Update
LOC_Os06g44080 No alias ubiquitin family protein, putative, expressed 0.03 Orthogroups_2024-Update
Potri.012G024300 No alias Ubiquitin supergroup;Ribosomal protein L40e 0.04 Orthogroups_2024-Update
Pp1s241_60V6 No alias ubiquitin fusion protein 0.03 Orthogroups_2024-Update
Pp1s333_9V6 No alias ubiquitin fusion protein 0.02 Orthogroups_2024-Update
Pp1s72_104V6 No alias polyubiquitin 0.02 Orthogroups_2024-Update
Solyc11g005650 No alias Ubiquitin family protein (AHRD V3.3 *-* AT4G02890.4) 0.03 Orthogroups_2024-Update
evm.model.tig00001336.12 No alias (at3g62250 : 155.0) ubiquitin 5 (UBQ5); FUNCTIONS IN:... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA InterProScan predictions
MF GO:0005515 protein binding IEA InterProScan predictions
CC GO:0005840 ribosome IEA InterProScan predictions
BP GO:0006412 translation IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000626 Ubiquitin_dom 49 120
IPR002906 Ribosomal_S27a 148 193
No external refs found!