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  5. Potri.002G221400

Potri.002G221400


Description : photosystem II light harvesting complex gene 2.2


Gene families : OG_42_0000070 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000070_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.002G221400
Cluster HCCA clusters: cluster_0073

Target Alias Description ECC score Gene Family Method Actions
407444 No alias light-harvesting chlorophyll B-binding protein 3 0.02 Orthogroups_2024-Update
423144 No alias photosystem I light harvesting complex gene 1 0.02 Orthogroups_2024-Update
75552 No alias photosystem II light harvesting complex gene 2.1 0.02 Orthogroups_2024-Update
Bradi1g42670 No alias photosystem I light harvesting complex gene 1 0.03 Orthogroups_2024-Update
Cre02.g110750 No alias Chlorophyll A-B binding family protein 0.02 Orthogroups_2024-Update
GRMZM2G072280 No alias photosystem I light harvesting complex gene 2 0.02 Orthogroups_2024-Update
GRMZM2G429955 No alias photosystem II light harvesting complex gene B1B2 0.02 Orthogroups_2024-Update
Kfl00100_0170 kfl00100_0170_v1.1 (at3g54890 : 240.0) Encodes a component of the light... 0.02 Orthogroups_2024-Update
Kfl00517_0030 kfl00517_0030_v1.... (at3g54890 : 129.0) Encodes a component of the light... 0.02 Orthogroups_2024-Update
Kfl00517_0040 kfl00517_0040_v1.1 (at3g54890 : 116.0) Encodes a component of the light... 0.02 Orthogroups_2024-Update
LOC_Os08g33820 No alias chlorophyll A-B binding protein, putative, expressed 0.02 Orthogroups_2024-Update
Mp7g06780.1 No alias component LHCb1/2/3 of LHC-II complex 0.02 Orthogroups_2024-Update
Mp7g06790.1 No alias component LHCb1/2/3 of LHC-II complex 0.03 Orthogroups_2024-Update
PSME_00014591-RA No alias (at4g10340 : 418.0) photosystem II encoding the... 0.02 Orthogroups_2024-Update
PSME_00044304-RA No alias (p13869|cb12_pethy : 391.0) Chlorophyll a-b binding... 0.02 Orthogroups_2024-Update
Potri.005G239300 No alias light-harvesting chlorophyll-protein complex II subunit B1 0.05 Orthogroups_2024-Update
Pp1s52_157V6 No alias light-harvesting complex ii protein lhcb2 0.02 Orthogroups_2024-Update
Sopen07g011840 No alias Chlorophyll A-B binding protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR022796 Chloroa_b-bind 66 231
No external refs found!