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  5. Potri.002G243600

Potri.002G243600


Description : Pentatricopeptide repeat (PPR) superfamily protein


Gene families : OG_42_0001418 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001418_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.002G243600
Cluster HCCA clusters: cluster_0073

Target Alias Description ECC score Gene Family Method Actions
425968 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Orthogroups_2024-Update
Bradi4g26900 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.05 Orthogroups_2024-Update
Seita.2G009700.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.9G568800.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.002G013700.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc12g098990 No alias Pentatricopeptide repeat-containing protein, putative... 0.04 Orthogroups_2024-Update
Sopen12g033730 No alias PPR repeat family 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 319 376
IPR002885 Pentatricopeptide_repeat 156 184
IPR002885 Pentatricopeptide_repeat 190 234
IPR002885 Pentatricopeptide_repeat 257 305
IPR002885 Pentatricopeptide_repeat 434 480
No external refs found!