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  5. Potri.002G245200

Potri.002G245200


Description : Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG_42_0000001 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.002G245200
Cluster HCCA clusters: cluster_0151

Target Alias Description ECC score Gene Family Method Actions
106991 No alias Pentatricopeptide repeat (PPR-like) superfamily protein 0.02 Orthogroups_2024-Update
79732 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Orthogroups_2024-Update
81625 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 Orthogroups_2024-Update
99677 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 Orthogroups_2024-Update
At3g01580 No alias Putative pentatricopeptide repeat-containing protein... 0.03 Orthogroups_2024-Update
At5g56310 No alias Pentatricopeptide repeat-containing protein At5g56310... 0.03 Orthogroups_2024-Update
Bradi1g75980 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Orthogroups_2024-Update
GRMZM2G073460 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Orthogroups_2024-Update
HORVU1Hr1G087370.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU3Hr1G067720.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU4Hr1G014730.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU4Hr1G067540.5 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU5Hr1G056450.2 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os02g07050 No alias pentatricopeptide, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os03g27880 No alias tetratricopeptide-like helical, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os06g40860 No alias pentatricopeptide, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os07g05560 No alias expressed protein 0.02 Orthogroups_2024-Update
LOC_Os08g28830 No alias pentatricopeptide, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os12g06070 No alias expressed protein 0.03 Orthogroups_2024-Update
PSME_00018763-RA No alias (at1g11290 : 389.0) Pentatricopeptide Repeat Protein... 0.02 Orthogroups_2024-Update
PSME_00054674-RA No alias (at4g33170 : 289.0) Tetratricopeptide repeat (TPR)-like... 0.02 Orthogroups_2024-Update
Seita.4G216600.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc04g063270 No alias Pentatricopeptide repeat-containing family protein (AHRD... 0.03 Orthogroups_2024-Update
Solyc05g023900 No alias Pentatricopeptide repeat-containing protein (AHRD V3.3... 0.03 Orthogroups_2024-Update
Solyc11g017290 No alias Pentatricopeptide repeat-containing protein (AHRD V3.3... 0.03 Orthogroups_2024-Update
Sopen11g026910 No alias PPR repeat family 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 71 115
IPR002885 Pentatricopeptide_repeat 171 206
IPR002885 Pentatricopeptide_repeat 373 420
IPR002885 Pentatricopeptide_repeat 275 303
IPR002885 Pentatricopeptide_repeat 247 273
IPR002885 Pentatricopeptide_repeat 347 372
IPR002885 Pentatricopeptide_repeat 448 471
No external refs found!