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- Species
- Populus trichocarpa
- Sequence
- Potri.002G253800
establishment of protein localization to organelle Jump to ...
Potri.002G253800
Description : photosystem I subunit E-2
Gene families : OG_42_0005311 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005311_tree
Expression Profile
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Co-expression Networks
Type Description Actions Neighborhood Populus release: Potri.002G253800 Cluster HCCA clusters: cluster_0050
Expression Context Conservation (ECC)
Target Alias Description ECC score Gene Family Method Actions Brara.A00845.1 No alias component *(PsaE) of PS-I complex 0.04 Orthogroups_2024-Update Glyma.10G042000 No alias photosystem I subunit E-2 0.03 Orthogroups_2024-Update Glyma.13G129400 No alias photosystem I subunit E-2 0.03 Orthogroups_2024-Update Glyma.13G129500 No alias photosystem I subunit E-2 0.03 Orthogroups_2024-Update Kfl00057_0180 kfl00057_0180_v1.1 (p12352|psae_chlre : 88.2) Photosystem I reaction center... 0.02 Orthogroups_2024-Update Mp1g24020.1 No alias component PsaE of PS-I complex 0.02 Orthogroups_2024-Update Pp1s101_2V6 No alias photosystem i reaction center subunit iv a 0.03 Orthogroups_2024-Update Pp1s319_36V6 No alias photosystem i reaction center subunit iv a 0.03 Orthogroups_2024-Update Pp1s334_17V6 No alias photosystem i reaction center subunit iv a 0.02 Orthogroups_2024-Update Sobic.002G119500.3 No alias component *(PsaE) of PS-I complex 0.03 Orthogroups_2024-Update Solyc06g083680 No alias Photosystem I reaction center subunit IV (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update Solyc09g063130 No alias Photosystem I reaction center subunit IV (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update Sopen06g035100 No alias Photosystem I reaction centre subunit IV / PsaE 0.05 Orthogroups_2024-Update
Functional Annotation
Type GO Term Name Evidence Source CC GO:0005575 cellular_component None Extended BP GO:0008150 biological_process None Extended BP GO:0008152 metabolic process None Extended CC GO:0009521 photosystem None Extended CC GO:0009522 photosystem I IEA InterProScan predictions CC GO:0009538 photosystem I reaction center IEA InterProScan predictions BP GO:0009987 cellular process None Extended BP GO:0015979 photosynthesis IEA InterProScan predictions CC GO:0032991 protein-containing complex None Extended BP GO:0044237 cellular metabolic process None Extended CC GO:0044424 intracellular part None Extended CC GO:0044425 membrane part None Extended CC GO:0044436 thylakoid part None Extended CC GO:0044464 cell part None Extended CC GO:0098796 membrane protein complex None Extended Type GO Term Name Evidence Source No Predicted GO terms available for this sequence
InterPro domains Description Start Stop IPR003375 PSI_PsaE 80 107 External LinksNo external refs found! Loading ... please wait ...