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  5. Sopen11g029660

Sopen11g029660


Description : NB-ARC domain


Gene families : OG_42_0000039 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000039_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen11g029660
Cluster HCCA clusters: Cluster_150

Target Alias Description ECC score Gene Family Method Actions
Glyma.03G048100 No alias disease resistance protein (TIR-NBS-LRR class) 0.03 Orthogroups_2024-Update
Glyma.09G020600 No alias NB-ARC domain-containing disease resistance protein 0.03 Orthogroups_2024-Update
Glyma.15G233400 No alias LRR and NB-ARC domains-containing disease resistance protein 0.03 Orthogroups_2024-Update
Glyma.19G134200 No alias LRR and NB-ARC domains-containing disease resistance protein 0.03 Orthogroups_2024-Update
Glyma.19G135500 No alias NB-ARC domain-containing disease resistance protein 0.03 Orthogroups_2024-Update
Glyma.19G137200 No alias LRR and NB-ARC domains-containing disease resistance protein 0.03 Orthogroups_2024-Update
HORVU2Hr1G087730.12 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os02g38392 No alias NBS-LRR disease resistance protein, putative, expressed 0.02 Orthogroups_2024-Update
Potri.017G128000 No alias LRR and NB-ARC domains-containing disease resistance protein 0.03 Orthogroups_2024-Update
Potri.017G133600 No alias LRR and NB-ARC domains-containing disease resistance protein 0.02 Orthogroups_2024-Update
Seita.3G195000.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Solyc01g106410 No alias Nbs-lrr resistance protein, putative (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Solyc08g007630 No alias Disease resistance protein (AHRD V3.3 *** A0A068EX87_SOLHA) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
MF GO:0043531 ADP binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 1281 1299
IPR001611 Leu-rich_rpt 1304 1322
IPR001611 Leu-rich_rpt 1327 1345
IPR001611 Leu-rich_rpt 1235 1253
IPR001611 Leu-rich_rpt 1258 1276
IPR001611 Leu-rich_rpt 1212 1230
IPR001611 Leu-rich_rpt 1189 1207
IPR001611 Leu-rich_rpt 1143 1161
IPR001611 Leu-rich_rpt 1166 1184
IPR002182 NB-ARC 173 393
No external refs found!