Potri.002G257000

Description : Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain

Gene families : OG_42_0000547 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000547_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Populus release: Potri.002G257000
Cluster	HCCA clusters: cluster_0084

Target	Alias	Description	ECC score	Gene Family Method
At5g43960	No alias	Gb [Source:UniProtKB/TrEMBL;Acc:Q9FND0]	0.02	Orthogroups_2024-Update
HORVU7Hr1G061850.1	No alias	mRNA endoribonuclease *(G3BP)	0.03	Orthogroups_2024-Update
LOC_Os07g41180	No alias	RNA-binding protein-like, putative, expressed	0.02	Orthogroups_2024-Update
PSME_00006402-RA	No alias	(at5g43960 : 231.0) Nuclear transport factor 2 (NTF2)...	0.04	Orthogroups_2024-Update
Pp1s6_129V6	No alias	rna binding	0.03	Orthogroups_2024-Update
Seita.2G374100.1	No alias	mRNA endoribonuclease *(G3BP)	0.03	Orthogroups_2024-Update
Seita.7G063800.1	No alias	mRNA endoribonuclease *(G3BP)	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR002075	NTF2	16	130
IPR000504	RRM_dom	330	393

External Links

No external refs found!