Potri.003G031400

Description : FAR1-related sequence 6

Gene families : OG_42_0000075 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000075_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Populus release: Potri.003G031400
Cluster	HCCA clusters: cluster_0078

Target	Alias	Description	ECC score	Gene Family Method
Bradi1g48350	No alias	FAR1-related sequence 5	0.02	Orthogroups_2024-Update
Glyma.01G000600	No alias	FAR1-related sequence 5	0.04	Orthogroups_2024-Update
Glyma.02G273500	No alias	FAR1-related sequence 3	0.03	Orthogroups_2024-Update
Glyma.09G039300	No alias	FAR1-related sequence 11	0.03	Orthogroups_2024-Update
Pp1s222_126V6	No alias	No description available	0.02	Orthogroups_2024-Update
Seita.9G015500.1	No alias	FRS/FRF-type transcription factor	0.04	Orthogroups_2024-Update
Solyc06g068210	No alias	Protein FAR1-RELATED SEQUENCE 8 (AHRD V3.3 *** W9RSB0_9ROSA)	0.04	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	IEA	InterProScan predictions
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR018289	MULE_transposase_dom	253	346
IPR004330	FAR1_DNA_bnd_dom	50	133
IPR007527	Znf_SWIM	550	572

External Links

No external refs found!