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  5. Sopen11g030110

Sopen11g030110


Description : Protein of unknown function DUF260


Gene families : OG_42_0000073 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000073_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen11g030110
Cluster HCCA clusters: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
A4A49_32358 No alias lob domain-containing protein 15 0.03 Orthogroups_2024-Update
Bradi3g35280 No alias LOB domain-containing protein 22 0.03 Orthogroups_2024-Update
Brara.C02074.1 No alias AS2/LOB-type transcription factor 0.03 Orthogroups_2024-Update
Brara.G01383.1 No alias AS2/LOB-type transcription factor 0.02 Orthogroups_2024-Update
GRMZM2G133806 No alias Lateral organ boundaries (LOB) domain family protein 0.02 Orthogroups_2024-Update
Glyma.19G257300 No alias LOB domain-containing protein 11 0.02 Orthogroups_2024-Update
HORVU1Hr1G012720.1 No alias AS2/LOB-type transcription factor 0.02 Orthogroups_2024-Update
HORVU4Hr1G002480.2 No alias AS2/LOB-type transcription factor 0.02 Orthogroups_2024-Update
LOC_Os01g39150 No alias DUF260 domain containing protein, putative, expressed 0.04 Orthogroups_2024-Update
LOC_Os03g41600 No alias DUF260 domain containing protein, putative, expressed 0.03 Orthogroups_2024-Update
MA_10434782g0020 No alias (at1g65620 : 214.0) Required for formation of a... 0.03 Orthogroups_2024-Update
MA_85817g0010 No alias (at1g07900 : 152.0) LOB domain-containing protein 1... 0.06 Orthogroups_2024-Update
MA_927067g0010 No alias (at2g28500 : 120.0) LOB domain-containing protein 11... 0.06 Orthogroups_2024-Update
PSME_00009389-RA No alias (at2g28500 : 147.0) LOB domain-containing protein 11... 0.02 Orthogroups_2024-Update
PSME_00020323-RA No alias (at1g07900 : 152.0) LOB domain-containing protein 1... 0.03 Orthogroups_2024-Update
PSME_00043149-RA No alias (at1g07900 : 141.0) LOB domain-containing protein 1... 0.03 Orthogroups_2024-Update
Potri.001G081400 No alias LOB domain-containing protein 4 0.03 Orthogroups_2024-Update
Potri.001G196400 No alias LOB domain-containing protein 22 0.03 Orthogroups_2024-Update
Potri.010G250700 No alias LOB domain-containing protein 10 0.02 Orthogroups_2024-Update
Potri.012G083500 No alias Lateral organ boundaries (LOB) domain family protein 0.02 Orthogroups_2024-Update
Solyc06g050430 No alias LOB domain-containing protein, putative (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Solyc06g071660 No alias LOB domain-containing protein, putative (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Solyc06g075330 No alias LOB domain-containing protein, putative (AHRD V3.3 ***... 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR004883 LOB 36 133
No external refs found!