Sopen11g030130

Description : Tetraspanin family

Gene families : OG_42_0007149 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0007149_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen11g030130
Cluster	HCCA clusters: Cluster_159

Target	Alias	Description	ECC score	Gene Family Method
At3g45600	No alias	Tetraspanin-3 [Source:UniProtKB/Swiss-Prot;Acc:Q9M1E7]	0.04	Orthogroups_2024-Update
Glyma.11G152124	No alias	tetraspanin3	0.02	Orthogroups_2024-Update
MA_19090g0010	No alias	(at3g45600 : 251.0) Member of TETRASPANIN family;...	0.03	Orthogroups_2024-Update
PSME_00034007-RA	No alias	(at3g45600 : 252.0) Member of TETRASPANIN family;...	0.02	Orthogroups_2024-Update
Seita.3G045700.1	No alias	Unknown function	0.06	Orthogroups_2024-Update
Solyc11g072480	No alias	Tetraspanin (AHRD V3.3 *** A0A103XGG0_CYNCS)	0.04	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0016021	integral component of membrane	IEA	InterProScan predictions
CC	GO:0031224	intrinsic component of membrane	None	Extended
CC	GO:0044425	membrane part	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR018499	Tetraspanin/Peripherin	1	200

External Links

No external refs found!