Description : WHIRLY 2
Gene families : OG_42_0002639 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002639_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Populus release: Potri.003G048700 | |
Cluster | HCCA clusters: cluster_0098 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Brara.H02575.1 | No alias | recombination mediator *(Whirly) | 0.03 | Orthogroups_2024-Update | |
Solyc05g007100 | No alias | Single-stranded DNA-binding protein WHY1, chloroplastic... | 0.03 | Orthogroups_2024-Update | |
Solyc11g044750 | No alias | mtDNA-binding protein WHIRLY2-like | 0.03 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003697 | single-stranded DNA binding | IEA | InterProScan predictions |
BP | GO:0006355 | regulation of transcription, DNA-templated | IEA | InterProScan predictions |
BP | GO:0006952 | defense response | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No Predicted GO terms available for this sequence |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR013742 | Whirly | 54 | 188 |
No external refs found! |