1. Home
  2. Species
  3. Populus trichocarpa
  4. Sequence
  5. Potri.003G050900

Potri.003G050900


Description : delta tonoplast integral protein


Gene families : OG_42_0000183 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000183_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Populus release: Potri.003G050900
Cluster HCCA clusters: cluster_0171

Target Alias Description ECC score Gene Family Method Actions
At3g26520 No alias Aquaporin TIP1-2 [Source:UniProtKB/Swiss-Prot;Acc:Q41963] 0.04 Orthogroups_2024-Update
Bradi1g75290 No alias gamma tonoplast intrinsic protein 0.02 Orthogroups_2024-Update
Bradi2g62520 No alias tonoplast intrinsic protein 1;3 0.04 Orthogroups_2024-Update
Brara.D02239.1 No alias tonoplast intrinsic protein *(TIP) 0.03 Orthogroups_2024-Update
Brara.G02327.1 No alias tonoplast intrinsic protein *(TIP) 0.03 Orthogroups_2024-Update
Glyma.19G186100 No alias gamma tonoplast intrinsic protein 0.03 Orthogroups_2024-Update
HORVU4Hr1G079230.1 No alias tonoplast intrinsic protein *(TIP) 0.02 Orthogroups_2024-Update
Kfl00064_0100 kfl00064_0100_v1.1 (q94cs9|tip12_orysa : 98.2) Probable aquaporin TIP1.2... 0.02 Orthogroups_2024-Update
LOC_Os01g13130 No alias aquaporin protein, putative, expressed 0.02 Orthogroups_2024-Update
MA_3515726g0010 No alias (at3g16240 : 111.0) Delta tonoplast intrinsic protein,... 0.03 Orthogroups_2024-Update
PSME_00031350-RA No alias (at2g36830 : 334.0) Encodes a tonoplast intrinsic... 0.03 Orthogroups_2024-Update
Seita.5G007500.1 No alias tonoplast intrinsic protein *(TIP) 0.03 Orthogroups_2024-Update
Sobic.009G085900.1 No alias tonoplast intrinsic protein *(TIP) 0.03 Orthogroups_2024-Update
Sopen03g039350 No alias Major intrinsic protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0015267 channel activity IEA InterProScan predictions
CC GO:0016020 membrane IEA InterProScan predictions
BP GO:0055085 transmembrane transport IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000425 MIP 15 232
No external refs found!