Potri.003G077400

Description : Matrixin family protein

Gene families : OG_42_0000704 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000704_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Populus release: Potri.003G077400
Cluster	HCCA clusters: cluster_0062

Target	Alias	Description	ECC score	Gene Family Method
GRMZM2G179768	No alias	matrix metalloproteinase	0.03	Orthogroups_2024-Update
Glyma.01G037100	No alias	Matrixin family protein	0.03	Orthogroups_2024-Update
Glyma.02G215700	No alias	matrix metalloproteinase	0.03	Orthogroups_2024-Update
PSME_00023671-RA	No alias	(at4g16640 : 207.0) Matrixin family protein; FUNCTIONS...	0.04	Orthogroups_2024-Update
Potri.004G190300	No alias	Matrixin family protein	0.04	Orthogroups_2024-Update
Seita.3G176100.1	No alias	M10-class (Matrixin) metalloprotease & EC_3.4 hydrolase...	0.02	Orthogroups_2024-Update
Solyc10g018750	No alias	Metalloendoproteinase 1, putative (AHRD V3.3 - B9RD50_RICCO)	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004175	endopeptidase activity	None	Extended
MF	GO:0004222	metalloendopeptidase activity	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006508	proteolysis	IEA	InterProScan predictions
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008233	peptidase activity	None	Extended
MF	GO:0008237	metallopeptidase activity	None	Extended
MF	GO:0008270	zinc ion binding	IEA	InterProScan predictions
MF	GO:0016787	hydrolase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
CC	GO:0031012	extracellular matrix	IEA	InterProScan predictions
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
CC	GO:0044421	extracellular region part	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
MF	GO:0070011	peptidase activity, acting on L-amino acid peptides	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001818	Pept_M10_metallopeptidase	169	324
IPR002477	Peptidoglycan-bd-like	74	129

External Links

No external refs found!