Description : Core histone H2A/H2B/H3/H4
Gene families : OG_42_0000138 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000138_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Solanum release: Sopen11g030880 | |
Cluster | HCCA clusters: Cluster_150 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
170948 | No alias | Histone superfamily protein | 0.03 | Orthogroups_2024-Update | |
A4A49_29055 | No alias | putative histone h2a.4 | 0.03 | Orthogroups_2024-Update | |
A4A49_30810 | No alias | histone h2ax | 0.03 | Orthogroups_2024-Update | |
At1g08880 | No alias | Histone H2A [Source:UniProtKB/TrEMBL;Acc:A0A178W8H7] | 0.04 | Orthogroups_2024-Update | |
At1g51060 | No alias | Probable histone H2A.1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C681] | 0.03 | Orthogroups_2024-Update | |
At1g54690 | No alias | Probable histone H2AXb [Source:UniProtKB/Swiss-Prot;Acc:Q9S9K7] | 0.03 | Orthogroups_2024-Update | |
At3g20670 | No alias | Probable histone H2A.2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LHQ5] | 0.04 | Orthogroups_2024-Update | |
At4g27230 | No alias | Probable histone H2A.3 [Source:UniProtKB/Swiss-Prot;Acc:O81826] | 0.03 | Orthogroups_2024-Update | |
At5g27670 | No alias | Histone H2A [Source:UniProtKB/TrEMBL;Acc:A0A178UFF2] | 0.03 | Orthogroups_2024-Update | |
At5g59870 | No alias | Probable histone H2A.7 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJE8] | 0.03 | Orthogroups_2024-Update | |
Bradi1g25390 | No alias | histone H2A 10 | 0.02 | Orthogroups_2024-Update | |
Brara.A02813.1 | No alias | histone *(H2A) | 0.03 | Orthogroups_2024-Update | |
Brara.B01060.1 | No alias | histone *(H2A) | 0.02 | Orthogroups_2024-Update | |
Brara.C01065.1 | No alias | histone *(H2A) | 0.04 | Orthogroups_2024-Update | |
Brara.E02150.1 | No alias | histone *(H2A) | 0.03 | Orthogroups_2024-Update | |
Brara.F02852.1 | No alias | histone *(H2A) | 0.03 | Orthogroups_2024-Update | |
Brara.J01356.1 | No alias | histone *(H2A) | 0.03 | Orthogroups_2024-Update | |
Cre06.g265350 | No alias | histone H2A 10 | 0.04 | Orthogroups_2024-Update | |
Cre06.g268050 | No alias | histone H2A 10 | 0.03 | Orthogroups_2024-Update | |
Cre06.g268300 | No alias | histone H2A 10 | 0.01 | Orthogroups_2024-Update | |
Cre06.g273900 | No alias | histone H2A 10 | 0.01 | Orthogroups_2024-Update | |
Cre06.g274200 | No alias | histone H2A 10 | 0.01 | Orthogroups_2024-Update | |
Cre06.g274800 | No alias | histone H2A 10 | 0.01 | Orthogroups_2024-Update | |
Cre06.g275850 | No alias | histone H2A 10 | 0.02 | Orthogroups_2024-Update | |
Cre12.g504750 | No alias | histone H2A 10 | 0.02 | Orthogroups_2024-Update | |
Cre13.g570100 | No alias | histone H2A 10 | 0.02 | Orthogroups_2024-Update | |
Cre17.g708550 | No alias | histone H2A 10 | 0.02 | Orthogroups_2024-Update | |
Cre17.g711700 | No alias | histone H2A 10 | 0.04 | Orthogroups_2024-Update | |
Cre17.g713400 | No alias | histone H2A 10 | 0.03 | Orthogroups_2024-Update | |
GRMZM2G041381 | No alias | histone H2A 2 | 0.05 | Orthogroups_2024-Update | |
GRMZM2G109448 | No alias | histone H2A 12 | 0.04 | Orthogroups_2024-Update | |
GRMZM2G151726 | No alias | histone H2A 2 | 0.03 | Orthogroups_2024-Update | |
GRMZM2G151826 | No alias | histone H2A 2 | 0.05 | Orthogroups_2024-Update | |
Glyma.03G148100 | No alias | Histone superfamily protein | 0.03 | Orthogroups_2024-Update | |
Glyma.03G241800 | No alias | gamma histone variant H2AX | 0.05 | Orthogroups_2024-Update | |
Glyma.12G215500 | No alias | histone H2A 10 | 0.03 | Orthogroups_2024-Update | |
Glyma.13G286000 | No alias | histone H2A 10 | 0.02 | Orthogroups_2024-Update | |
Glyma.13G333800 | No alias | histone H2A 12 | 0.05 | Orthogroups_2024-Update | |
Glyma.13G333900 | No alias | histone H2A 12 | 0.03 | Orthogroups_2024-Update | |
Glyma.13G334300 | No alias | histone H2A 12 | 0.06 | Orthogroups_2024-Update | |
Glyma.15G040200 | No alias | histone H2A 12 | 0.06 | Orthogroups_2024-Update | |
Glyma.15G040300 | No alias | histone H2A 12 | 0.05 | Orthogroups_2024-Update | |
Glyma.15G040400 | No alias | histone H2A 12 | 0.05 | Orthogroups_2024-Update | |
Glyma.19G151400 | No alias | gamma histone variant H2AX | 0.04 | Orthogroups_2024-Update | |
Glyma.19G234100 | No alias | histone H2A 7 | 0.03 | Orthogroups_2024-Update | |
HORVU2Hr1G043860.1 | No alias | histone *(H2A) | 0.04 | Orthogroups_2024-Update | |
HORVU4Hr1G058810.1 | No alias | histone *(H2A) | 0.02 | Orthogroups_2024-Update | |
HORVU5Hr1G026650.2 | No alias | histone *(H2A) | 0.02 | Orthogroups_2024-Update | |
HORVU6Hr1G021160.1 | No alias | histone *(H2A) | 0.02 | Orthogroups_2024-Update | |
HORVU6Hr1G021260.2 | No alias | histone *(H2A) | 0.04 | Orthogroups_2024-Update | |
HORVU7Hr1G100100.3 | No alias | histone *(H2A) | 0.03 | Orthogroups_2024-Update | |
HORVU7Hr1G100110.4 | No alias | histone *(H2A) | 0.03 | Orthogroups_2024-Update | |
HORVU7Hr1G100120.13 | No alias | histone *(H2A) | 0.04 | Orthogroups_2024-Update | |
HORVU7Hr1G100400.2 | No alias | histone *(H2A) | 0.02 | Orthogroups_2024-Update | |
Kfl00099_g21 | kfl00099_g21_v1.1 | (q2qpg9|h2axb_orysa : 166.0) Probable histone H2AXb -... | 0.03 | Orthogroups_2024-Update | |
Kfl00125_0190 | kfl00125_0190_v1.1 | (p50567|h2a_chlre : 169.0) Histone H2A - Chlamydomonas... | 0.02 | Orthogroups_2024-Update | |
LOC_Os03g17100 | No alias | Core histone H2A/H2B/H3/H4 domain containing protein,... | 0.02 | Orthogroups_2024-Update | |
MA_7320190g0010 | No alias | (p19177|h2a_petcr : 149.0) Histone H2A - Petroselinum... | 0.03 | Orthogroups_2024-Update | |
MA_865576g0010 | No alias | (p50567|h2a_chlre : 138.0) Histone H2A - Chlamydomonas... | 0.02 | Orthogroups_2024-Update | |
MA_962778g0010 | No alias | (q2hu68|h2a1_medtr : 184.0) Probable histone H2A.1 -... | 0.03 | Orthogroups_2024-Update | |
PSME_00040346-RA | No alias | (p50567|h2a_chlre : 144.0) Histone H2A - Chlamydomonas... | 0.02 | Orthogroups_2024-Update | |
Pp1s72_85V6 | No alias | histone h2a | 0.01 | Orthogroups_2024-Update | |
Seita.2G287100.1 | No alias | histone *(H2A) | 0.04 | Orthogroups_2024-Update | |
Seita.3G063000.1 | No alias | histone *(H2A) | 0.02 | Orthogroups_2024-Update | |
Seita.5G370600.1 | No alias | histone *(H2A) | 0.04 | Orthogroups_2024-Update | |
Seita.5G370700.1 | No alias | histone *(H2A) | 0.03 | Orthogroups_2024-Update | |
Seita.9G450000.1 | No alias | histone *(H2A) | 0.04 | Orthogroups_2024-Update | |
Sobic.001G416800.1 | No alias | histone *(H2A) | 0.04 | Orthogroups_2024-Update | |
Solyc01g099410 | No alias | Histone H2A (AHRD V3.3 *** G8IIJ5_SOLLC) | 0.03 | Orthogroups_2024-Update | |
Solyc09g010400 | No alias | Histone H2A (AHRD V3.3 *** K4CR67_SOLLC) | 0.03 | Orthogroups_2024-Update | |
Solyc09g074300 | No alias | Histone H2A (AHRD V3.3 *** K4CV07_SOLLC) | 0.04 | Orthogroups_2024-Update | |
Solyc09g082710 | No alias | Histone H2A (AHRD V3.3 *** K4CVP7_SOLLC) | 0.04 | Orthogroups_2024-Update | |
Solyc10g006560 | No alias | Histone H2A (AHRD V3.3 *** A0A0V0H7M3_SOLCH) | 0.03 | Orthogroups_2024-Update | |
Solyc11g073250 | No alias | Histone H2A (AHRD V3.3 *** K4DB31_SOLLC) | 0.04 | Orthogroups_2024-Update | |
Solyc11g073260 | No alias | Histone H2A (AHRD V3.3 *** K4DB32_SOLLC) | 0.04 | Orthogroups_2024-Update | |
Solyc12g005270 | No alias | Histone H2A (AHRD V3.3 *** K4DB65_SOLLC) | 0.03 | Orthogroups_2024-Update | |
evm.model.contig_533.4 | No alias | (p16866|h2a4_volca : 182.0) Histone H2A-IV - Volvox... | 0.02 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000786 | nucleosome | IEA | InterProScan predictions |
MF | GO:0003677 | DNA binding | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No Predicted GO terms available for this sequence |
No external refs found! |